RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 DTWD2Q8NBA8 298 aa11.27□□□□□ -0.61
USP39-212ENST00000465514 YTHDC1Q96MU7 727 aaKnown RBP11.27□□□□□ -0.61
USP39-212ENST00000465514 CDCA3Q99618 268 aaPredicted RBP11.27□□□□□ -0.61
USP39-212ENST00000465514 AMNQ9BXJ7 453 aa11.27□□□□□ -0.61
USP39-212ENST00000465514 RNPEPQ9H4A4 650 aa11.27□□□□□ -0.61
USP39-212ENST00000465514 PXMP2Q9NR77 195 aa11.27□□□□□ -0.61
USP39-212ENST00000465514 H3BRB1 525 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 PPP1R11O60927 126 aaPredicted RBP11.26□□□□□ -0.61
USP39-212ENST00000465514 GGPS1O95749 300 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 HSD17B4P51659 736 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 KCNC3Q14003 757 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 LPIN1Q14693 890 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 SEC23AQ15436 765 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 CELF3Q5SZQ8 465 aaKnown RBP11.26□□□□□ -0.61
USP39-212ENST00000465514 TMEM184AQ6ZMB5 413 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 CYB5R4Q7L1T6 521 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 DCLK2Q8N568 766 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 LINC01599Q8WXQ3 324 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 MTMR8Q96EF0 704 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 IL25Q9H293 177 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 POMKQ9H5K3 350 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 TUT1Q9H6E5 874 aaKnown RBP11.26□□□□□ -0.61
USP39-212ENST00000465514 EHMT1Q9H9B1 1298 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 MAD2L2Q9UI95 211 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 SUPT16HQ9Y5B9 1047 aaKnown RBP11.26□□□□□ -0.61
USP39-212ENST00000465514 ASPMQ8IZT6 3477 aa11.26□□□□□ -0.61
USP39-212ENST00000465514 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
USP39-212ENST00000465514 ZBTB5O15062 677 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 LGALS2P05162 132 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 MYCLP12524 364 aaPredicted RBP11.25□□□□□ -0.61
USP39-212ENST00000465514 NPR3P17342 541 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 GATMP50440 423 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 ERVFC1P60507 584 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 GHRHRQ02643 423 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 STOX1Q6ZVD7 989 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 RUBCNQ92622 972 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 PDCD2LQ9BRP1 358 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 PCDHA1Q9Y5I3 950 aa11.25□□□□□ -0.61
USP39-212ENST00000465514 CACNA1IQ9P0X4 2223 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 GNAT1P11488 350 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 UBA1P22314 1058 aaKnown RBP11.24□□□□□ -0.61
USP39-212ENST00000465514 HOXA13P31271 388 aaPredicted RBP11.24□□□□□ -0.61
USP39-212ENST00000465514 ARHGAP4P98171 946 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 UBE3AQ05086 875 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 SLC35G1Q2M3R5 365 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 PLPP4Q5VZY2 271 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 VSIG10LQ86VR7 867 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 NPAS4Q8IUM7 802 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 CRIPAKQ8N1N5 446 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 TDRD5Q8NAT2 981 aaKnown RBP11.24□□□□□ -0.61
USP39-212ENST00000465514 LMBR1Q8WVP7 490 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 MAP3K20Q9NYL2 800 aaKnown RBP11.24□□□□□ -0.61
USP39-212ENST00000465514 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
USP39-212ENST00000465514 ZFYVE26Q68DK2 2539 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 FSCN2O14926 492 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 FGF18O76093 207 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 HOXB8P17481 243 aaPredicted RBP11.23□□□□□ -0.61
USP39-212ENST00000465514 PDE4AP27815 886 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 SP2Q02086 613 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 PTH1RQ03431 593 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 MGAT3Q09327 533 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 TRDNQ13061 729 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 GRM4Q14833 912 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 PGM5Q15124 567 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 TTC22Q5TAA0 569 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 KCNV1Q6PIU1 500 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 RUFY4Q6ZNE9 571 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 TRIM50Q86XT4 487 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 HOMER1Q86YM7 354 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 SAMD3Q8N6K7 520 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 IL31RAQ8NI17 732 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 RIN2Q8WYP3 895 aaPredicted RBP11.23□□□□□ -0.61
USP39-212ENST00000465514 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
USP39-212ENST00000465514 NECTIN4Q96NY8 510 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 PIGSQ96S52 555 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 RTP3Q9BQQ7 232 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 SENP2Q9HC62 589 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 ERVK-5Q9HDB9 667 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 PCDHB12Q9Y5F1 795 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 C2orf16Q68DN1 1984 aa11.23□□□□□ -0.61
USP39-212ENST00000465514 FRYQ5TBA9 3013 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 GCOM1H8Y6P7 765 aaPredicted RBP11.22□□□□□ -0.61
USP39-212ENST00000465514 IFIT3O14879 490 aaKnown RBP11.22□□□□□ -0.61
USP39-212ENST00000465514 CYP21A2P08686 494 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 WEE2P0C1S8 567 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 POLR2MP0CAP2 368 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 TGFB3P10600 412 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 GSPT1P15170 499 aaKnown RBP11.22□□□□□ -0.61
USP39-212ENST00000465514 CCND2P30279 289 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 ADAM17P78536 824 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 APOBRQ0VD83 1088 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 TRAF1Q13077 416 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 FBXO47Q5MNV8 452 aa11.22□□□□□ -0.61
USP39-212ENST00000465514 SPOUT1Q5T280 376 aaKnown RBP11.22□□□□□ -0.61
USP39-212ENST00000465514 PDE12Q6L8Q7 609 aaKnown RBP11.22□□□□□ -0.61
USP39-212ENST00000465514 CES5AQ6NT32 575 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms