RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 IGLV3-22A0A075B6J6 115 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 NPHP3-ACAD11A0A0J9YXS1 232 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 MEIS1O00470 390 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 NFIBO00712 420 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 TNPO2O14787 897 aaKnown RBP9.23□□□□□ -0.93
UBE4B-205ENST00000465408 TBX3O15119 743 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 FLOT1O75955 427 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 HMGCRP04035 888 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 ICAM1P05362 532 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 PLA2G4BP0C869 781 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 ALAS1P13196 640 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 VCAM1P19320 739 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 CCNE1P24864 410 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 CACNB1Q02641 598 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-205ENST00000465408 SPAG1Q07617 926 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 SPIRE1Q08AE8 756 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 SPP2Q13103 211 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 FILIP1LQ4L180 1135 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 SPECC1LQ69YQ0 1117 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 TTI2Q6NXR4 508 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 CNNM4Q6P4Q7 775 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 GPBP1Q86WP2 473 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 SCYL3Q8IZE3 742 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 KIAA0895Q8NCT3 520 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 LPAR1Q92633 364 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 DDX12PQ92771 950 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 P2RX5Q93086 422 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 DHTKD1Q96HY7 919 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-205ENST00000465408 DUSP9Q99956 384 aaKnown RBP9.23□□□□□ -0.93
UBE4B-205ENST00000465408 SRRTQ9BXP5 876 aaKnown RBP9.23□□□□□ -0.93
UBE4B-205ENST00000465408 VPS16Q9H269 839 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 TSPYL2Q9H2G4 693 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-205ENST00000465408 EHMT1Q9H9B1 1298 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 PICK1Q9NRD5 415 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 HOMER2Q9NSB8 354 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 GINM1Q9NU53 330 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 TRMT1Q9NXH9 659 aaKnown RBP9.23□□□□□ -0.93
UBE4B-205ENST00000465408 ADD3Q9UEY8 706 aaKnown RBP9.23□□□□□ -0.93
UBE4B-205ENST00000465408 PRKAG2Q9UGJ0 569 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 ZNF112Q9UJU3 913 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 VAV3Q9UKW4 847 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 CSADQ9Y600 493 aa9.23□□□□□ -0.93
UBE4B-205ENST00000465408 SETXQ7Z333 2677 aaKnown RBP9.22□□□□□ -0.93
UBE4B-205ENST00000465408 PVALEFA0A1B0GWK0 134 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 EML1O00423 815 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 N4BP3O15049 544 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 CHMP2AO43633 222 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 GFRA3O60609 400 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 CYP2C8P10632 490 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 PTPRAP18433 802 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 PBX1P40424 430 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 ADKP55263 362 aaKnown RBP9.22□□□□□ -0.93
UBE4B-205ENST00000465408 CYP4A11Q02928 519 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 SEMA3FQ13275 785 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 LRRC41Q15345 812 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 TCP11X2Q5H9J9 407 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 MUM1L1Q5H9M0 696 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 ANKRD40Q6AI12 368 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 IRF2BP1Q8IU81 584 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 PRPF38AQ8NAV1 312 aaKnown RBP9.22□□□□□ -0.93
UBE4B-205ENST00000465408 GLIS3Q8NEA6 775 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 ERMNQ8TAM6 284 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 CLEC4DQ8WXI8 215 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 DNAJC19Q96DA6 116 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 ATG4CQ96DT6 458 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 C16orf45Q96MC5 204 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-205ENST00000465408 FAM20AQ96MK3 541 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 CTAGE1Q96RT6 745 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 LRRC27Q9C0I9 530 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 NT5C3AQ9H0P0 336 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 AS3MTQ9HBK9 375 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 COL20A1Q9P218 1284 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
UBE4B-205ENST00000465408 CTDP1Q9Y5B0 961 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-205ENST00000465408 ANKRD11Q6UB99 2663 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-205ENST00000465408 MYH7BA7E2Y1 1941 aa9.21□□□□□ -0.93
UBE4B-205ENST00000465408 PTPRZ1P23471 2315 aaPredicted RBP9.21□□□□□ -0.93
UBE4B-205ENST00000465408 TPRP12270 2363 aaKnown RBP9.21□□□□□ -0.93
UBE4B-205ENST00000465408 DOCK3Q8IZD9 2030 aa9.21□□□□□ -0.93
UBE4B-205ENST00000465408 SLC26A4O43511 780 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 NRDCO43847 1150 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 ZBED4O75132 1171 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 KRT18P05783 430 aaKnown RBP9.21□□□□□ -0.94
UBE4B-205ENST00000465408 SPATA31C1P0DKV0 1188 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 ARP10275 920 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 CYP11B2P19099 503 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 HSD17B4P51659 736 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 USP14P54578 494 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 EPHB4P54760 987 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 PSMC6P62333 389 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 RAD51AP2Q09MP3 1159 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 COASYQ13057 564 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 LRCH2Q5VUJ6 765 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 CEP135Q66GS9 1140 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 HAUS3Q68CZ6 603 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 PPFIBP1Q86W92 1011 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 CATSPER3Q86XQ3 398 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 ERO1BQ86YB8 467 aa9.21□□□□□ -0.94
UBE4B-205ENST00000465408 CCAR2Q8N163 923 aaKnown RBP9.21□□□□□ -0.94
UBE4B-205ENST00000465408 CSGALNACT2Q8N6G5 542 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms