RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 DGKDQ16760 1214 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 UTP14CQ5TAP6 766 aaKnown RBP18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 POTEBQ6S5H4 581 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 PDILTQ8N807 584 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 ARMC5Q96C12 935 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 CALML4Q96GE6 196 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 ZNF333Q96JL9 665 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 LXNQ9BS40 222 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 PAK6Q9NQU5 681 aaPredicted RBP18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 KIAA1468Q9P260 1216 aa18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 MAFBQ9Y5Q3 323 aaPredicted RBP18.91■□□□□ 0.62
EXOSC3-203ENST00000465229 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 CPT1AP50416 773 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 STAT5BP51692 787 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 PSMC5P62195 406 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 TMEM119Q4V9L6 283 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 ZSCAN30Q86W11 494 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 AFAP1L1Q8TED9 768 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 RNF208Q9H0X6 261 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 ZSWIM4Q9H7M6 989 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 SPC25Q9HBM1 224 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 ZNF302Q9NR11 478 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 KIAA1024Q9UPX6 916 aa18.9■□□□□ 0.62
EXOSC3-203ENST00000465229 A0A087WWV3 80 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 POLR2DO15514 142 aaKnown RBP18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 ZNF862O60290 1169 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 ADCY5O95622 1261 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 LGALS2P05162 132 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 PLCG1P19174 1290 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 MUTP22033 750 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 BRDTQ58F21 947 aaPredicted RBP18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 GNASQ5JWF2 1037 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 POTEGQ6S5H5 508 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 KCNK18Q7Z418 384 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 TRIM50Q86XT4 487 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 KLHDC9Q8NEP7 349 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 RASSF8Q8NHQ8 419 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 LRRC15Q8TF66 581 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 CDK5RAP3Q96JB5 506 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 C16orf70Q9BSU1 422 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 NT5C3AQ9H0P0 336 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 AZI2Q9H6S1 392 aa18.89■□□□□ 0.62
EXOSC3-203ENST00000465229 KDM3AQ9Y4C1 1321 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 ZBTB39O15060 712 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 LYPLA2O95372 231 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 ATP4AP20648 1035 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 PSMC6P62333 389 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 E2F4Q16254 413 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 NAALADL2Q58DX5 795 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 RRAGBQ5VZM2 374 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 FAM160B1Q5W0V3 765 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 PDXDC2PQ6P474 469 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 PLPPR4Q7Z2D5 763 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 C4orf19Q8IY42 314 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 GLG1Q92896 1179 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 ATP6V0A1Q93050 837 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 DNAJC25Q9H1X3 360 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 SMARCAD1Q9H4L7 1026 aa18.89■□□□□ 0.61
EXOSC3-203ENST00000465229 EMSYQ7Z589 1322 aa18.88■□□□□ 0.61
EXOSC3-203ENST00000465229 IGSF9BQ9UPX0 1349 aa18.88■□□□□ 0.61
EXOSC3-203ENST00000465229 STBD1O95210 358 aa18.88■□□□□ 0.61
EXOSC3-203ENST00000465229 DHX58Q96C10 678 aa18.88■□□□□ 0.61
EXOSC3-203ENST00000465229 DEFB118Q96PH6 123 aa18.88■□□□□ 0.61
EXOSC3-203ENST00000465229 MCOLN1Q9GZU1 580 aa18.88■□□□□ 0.61
EXOSC3-203ENST00000465229 NAT10Q9H0A0 1025 aaKnown RBP18.88■□□□□ 0.61
EXOSC3-203ENST00000465229 RRAGDQ9NQL2 400 aaPredicted RBP18.88■□□□□ 0.61
EXOSC3-203ENST00000465229 ZNF286BP0CG31 522 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 CST5P28325 142 aaPredicted RBP18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 CLCN1P35523 988 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 IQCB1Q15051 598 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 CCSAPQ6IQ19 270 aaPredicted RBP18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 LUZP1Q86V48 1076 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 KCTD17Q8N5Z5 321 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 IQUBQ8NA54 791 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 PIGOQ8TEQ8 1089 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 NACC1Q96RE7 527 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 BPIFA3Q9BQP9 254 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 BLOC1S4Q9NUP1 217 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 DNM3Q9UQ16 869 aa18.87■□□□□ 0.61
EXOSC3-203ENST00000465229 E9PMD0 336 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 DKC1O60832 514 aaKnown RBP eCLIP18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 MYL3P08590 195 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 STAT6P42226 847 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 PRKCEQ02156 737 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 LRRC41Q15345 812 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 LONRF3Q496Y0 759 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 TRMT1LQ7Z2T5 733 aaKnown RBP18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 RNF180Q86T96 592 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 CEP57L1Q8IYX8 460 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 KAT2BQ92831 832 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 TUBE1Q9UJT0 475 aa18.86■□□□□ 0.61
EXOSC3-203ENST00000465229 H3BRB1 525 aa18.85■□□□□ 0.61
EXOSC3-203ENST00000465229 KPNA6O60684 536 aa18.85■□□□□ 0.61
EXOSC3-203ENST00000465229 MYCNP04198 464 aaPredicted RBP18.85■□□□□ 0.61
EXOSC3-203ENST00000465229 MARK3P27448 753 aa18.85■□□□□ 0.61
EXOSC3-203ENST00000465229 YWHABP31946 246 aaKnown RBP18.85■□□□□ 0.61
EXOSC3-203ENST00000465229 SLC26A2P50443 739 aa18.85■□□□□ 0.61
EXOSC3-203ENST00000465229 PURAQ00577 322 aaKnown RBP18.85■□□□□ 0.61
EXOSC3-203ENST00000465229 KCNA10Q16322 511 aa18.85■□□□□ 0.61
EXOSC3-203ENST00000465229 XKR3Q5GH77 459 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms