RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 ICA1Q05084 483 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 CACNB2Q08289 660 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 PLS1Q14651 629 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 COG2Q14746 738 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 SETDB1Q15047 1291 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 ZNF385CQ66K41 422 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 SCARA3Q6AZY7 606 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 TREML4Q6UXN2 200 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 BNC2Q6ZN30 1099 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 CATSPERGQ6ZRH7 1159 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 MB21D1Q8N884 522 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 KLHL23Q8NBE8 558 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 DIS3LQ8TF46 1054 aaKnown RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 LPAR1Q92633 364 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 KLHDC7BQ96G42 594 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 SPATA32Q96LK8 384 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 LBHD1Q9BQE6 289 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 MIR1-1HGQ9H1L0 117 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 PORCNQ9H237 461 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 ANTXR1Q9H6X2 564 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 TXNRD2Q9NNW7 524 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 PAG1Q9NWQ8 432 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 UBP1Q9NZI7 540 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 RBPJLQ9UBG7 517 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 STAP2Q9UGK3 403 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 OGDHLQ9ULD0 1010 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 ZMYND8Q9ULU4 1186 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 CTDP1Q9Y5B0 961 aaPredicted RBP6.92□□□□□ -1.3
SSBP1-204ENST00000465167 ZNF532Q9HCE3 1301 aa6.92□□□□□ -1.3
SSBP1-204ENST00000465167 BAZ2AQ9UIF9 1905 aaKnown RBP6.91□□□□□ -1.3
SSBP1-204ENST00000465167 FAM221AA4D161 298 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 KBTBD13C9JR72 458 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 STRNO43815 780 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 FLOT1O75955 427 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 F13A1P00488 732 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 CYP11A1P05108 521 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 SYN1P17600 705 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 ATP2B1P20020 1258 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 SHMT1P34896 483 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 PLCD1P51178 756 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 SEPT2Q15019 361 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 SUZ12Q15022 739 aaKnown RBP6.91□□□□□ -1.3
SSBP1-204ENST00000465167 SHROOM1Q2M3G4 852 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-204ENST00000465167 MAP3K21Q5TCX8 1036 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 LBX2Q6XYB7 198 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 MAP4K3Q8IVH8 894 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 GALNT11Q8NCW6 608 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 SDR42E1Q8WUS8 393 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 GATAD2BQ8WXI9 593 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 UBXN4Q92575 508 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 GAL3ST3Q96A11 431 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 SEC16BQ96JE7 1060 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 CCDC17Q96LX7 622 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 RIOK1Q9BRS2 568 aaKnown RBP6.91□□□□□ -1.3
SSBP1-204ENST00000465167 LRRCC1Q9C099 1032 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 BOLA2Q9H3K6 86 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 ATP8A2Q9NTI2 1148 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 CACNA2D2Q9NY47 1150 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 DDX20Q9UHI6 824 aaKnown RBP6.91□□□□□ -1.3
SSBP1-204ENST00000465167 ZNF236Q9UL36 1845 aa6.91□□□□□ -1.3
SSBP1-204ENST00000465167 MBD4O95243 580 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 ECEL1O95672 775 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 FGRP09769 529 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 CCND3P30281 292 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-204ENST00000465167 BMP8BP34820 402 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 COPB2P35606 906 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 JAG1P78504 1218 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 PTPN11Q06124 597 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-204ENST00000465167 APOBRQ0VD83 1088 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 SEPT6Q14141 434 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 GRB14Q14449 540 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 POU4F3Q15319 338 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 CCL14Q16627 93 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 MCF2L2Q86YR7 1114 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 LCORLQ8N3X6 602 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 ARRDC4Q8NCT1 418 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 ACER1Q8TDN7 264 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 KCNB2Q92953 911 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 LRRC3Q9BY71 257 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 SENP6Q9GZR1 1112 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-204ENST00000465167 SPATC1LQ9H0A9 340 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 MROH8Q9H579 483 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 ARMT1Q9H993 441 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 ZNF287Q9HBT7 754 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 DCP1AQ9NPI6 582 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-204ENST00000465167 ENAMQ9NRM1 1142 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 ARPP21Q9UBL0 812 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-204ENST00000465167 RCAN3Q9UKA8 241 aa6.9□□□□□ -1.3
SSBP1-204ENST00000465167 DNM1LO00429 736 aa6.89□□□□□ -1.31
SSBP1-204ENST00000465167 WDR46O15213 610 aaKnown RBP6.89□□□□□ -1.31
SSBP1-204ENST00000465167 PEX10O60683 326 aa6.89□□□□□ -1.31
SSBP1-204ENST00000465167 CILPO75339 1184 aa6.89□□□□□ -1.31
SSBP1-204ENST00000465167 DEAF1O75398 565 aaPredicted RBP6.89□□□□□ -1.31
SSBP1-204ENST00000465167 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
SSBP1-204ENST00000465167 SLC25A27O95847 323 aa6.89□□□□□ -1.31
SSBP1-204ENST00000465167 FCER1AP12319 257 aa6.89□□□□□ -1.31
SSBP1-204ENST00000465167 ATP5JP18859 108 aa6.89□□□□□ -1.31
SSBP1-204ENST00000465167 MAOBP27338 520 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms