RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TRANK1O15050 2925 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 FIBPO43427 364 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 LGR5O75473 907 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 BMP15O95972 392 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 CIITAP33076 1130 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 GDPD5Q8WTR4 605 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 HLA-CQ95604 372 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 INPP4AQ96PE3 977 aaPredicted RBP19.7■□□□□ 0.74
CPSF4-209ENST00000465132 MXRA8Q9BRK3 442 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 BCAS3Q9H6U6 928 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 LMCD1Q9NZU5 365 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 CEP131Q9UPN4 1083 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 MTMR6Q9Y217 621 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 EMSYQ7Z589 1322 aa19.7■□□□□ 0.74
CPSF4-209ENST00000465132 NCOR1O75376 2440 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 CYP3A7-CYP3A51PA0A087WV96 503 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 LINC01553A4QN01 128 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 RSPH10B2B2RC85 870 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 H3BRB1 525 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 MARCH6O60337 910 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 BAG4O95429 457 aaKnown RBP19.69■□□□□ 0.74
CPSF4-209ENST00000465132 RSPH10BP0C881 870 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 CYP3A7P24462 503 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 HOXC8P31273 242 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 THPOP40225 353 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 ERVK-21P61565 698 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 MTMR1Q13613 665 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 LETM2Q2VYF4 491 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 ATL3Q6DD88 541 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 CRYGNQ8WXF5 182 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 PGBD1Q96JS3 809 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 ZNF396Q96N95 335 aaPredicted RBP19.69■□□□□ 0.74
CPSF4-209ENST00000465132 TGS1Q96RS0 853 aaKnown RBP19.69■□□□□ 0.74
CPSF4-209ENST00000465132 TUT1Q9H6E5 874 aaKnown RBP19.69■□□□□ 0.74
CPSF4-209ENST00000465132 JADE2Q9NQC1 790 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 MTUS1Q9ULD2 1270 aa19.69■□□□□ 0.74
CPSF4-209ENST00000465132 REV3LO60673 3130 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 C17orf102A2RUQ5 167 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 CCNT1O60563 726 aaKnown RBP19.68■□□□□ 0.74
CPSF4-209ENST00000465132 LGALS2P05162 132 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 ICAM3P32942 547 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 MRPS9P82933 396 aaKnown RBP19.68■□□□□ 0.74
CPSF4-209ENST00000465132 MKRN4PQ13434 485 aaPredicted RBP19.68■□□□□ 0.74
CPSF4-209ENST00000465132 NEDD9Q14511 834 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 Q4G0T1 1027 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 FAM117BQ6P1L5 589 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.68■□□□□ 0.74
CPSF4-209ENST00000465132 DBF4BQ8NFT6 615 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 ATP6V0A1Q93050 837 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 SUGCTQ9HAC7 445 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 UBIAD1Q9Y5Z9 338 aa19.68■□□□□ 0.74
CPSF4-209ENST00000465132 TCF20Q9UGU0 1960 aaKnown RBP19.68■□□□□ 0.74
CPSF4-209ENST00000465132 XIRP2A4UGR9 3374 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 SPATA31C2B4DYI2 1134 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 MEIS1O00470 390 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 LAD1O00515 517 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 TBX3O15119 743 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 SMIM10L2AP0DMW4 78 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 SMIM10L2BP0DMW5 78 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 PLA2G4DQ86XP0 818 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 SLFN12Q8IYM2 578 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 SENP7Q9BQF6 1050 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 RTEL1Q9NZ71 1219 aa19.67■□□□□ 0.74
CPSF4-209ENST00000465132 DDX25Q9UHL0 483 aaKnown RBP19.67■□□□□ 0.74
CPSF4-209ENST00000465132 COL4A4P53420 1690 aaPredicted RBP19.67■□□□□ 0.74
CPSF4-209ENST00000465132 NOP56O00567 594 aaKnown RBP19.66■□□□□ 0.74
CPSF4-209ENST00000465132 F13A1P00488 732 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 AMHP03971 560 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 SEMA3FQ13275 785 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 PRR16Q569H4 304 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 PLEKHG4Q58EX7 1191 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 TTC38Q5R3I4 469 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 METTL7BQ6UX53 244 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 FERMT3Q86UX7 667 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 RNPEPQ9H4A4 650 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 TBC1D22BQ9NU19 505 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 RAPGEFL1Q9UHV5 662 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 CFAP45Q9UL16 551 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 INSL6Q9Y581 213 aa19.66■□□□□ 0.74
CPSF4-209ENST00000465132 BDP1A6H8Y1 2624 aa19.65■□□□□ 0.74
CPSF4-209ENST00000465132 TREHO43280 583 aa19.65■□□□□ 0.74
CPSF4-209ENST00000465132 BRD1O95696 1058 aa19.65■□□□□ 0.74
CPSF4-209ENST00000465132 CYFIP1Q7L576 1253 aa19.65■□□□□ 0.74
CPSF4-209ENST00000465132 FAM20AQ96MK3 541 aa19.65■□□□□ 0.74
CPSF4-209ENST00000465132 GPR20Q99678 358 aa19.65■□□□□ 0.74
CPSF4-209ENST00000465132 SDF4Q9BRK5 362 aa19.65■□□□□ 0.74
CPSF4-209ENST00000465132 NEMFO60524 1076 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 CAND2O75155 1236 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 ITGB5P18084 799 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 ATP2B1P20020 1258 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 HTRA4P83105 476 aaPredicted RBP19.64■□□□□ 0.73
CPSF4-209ENST00000465132 RESTQ13127 1097 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 MYOCDQ8IZQ8 938 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 MBOAT7Q96N66 472 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 ZNF577Q9BSK1 485 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 C1QTNF1Q9BXJ1 281 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 KCNH7Q9NS40 1196 aa19.64■□□□□ 0.73
CPSF4-209ENST00000465132 FAM86B1E9PN63 330 aa19.63■□□□□ 0.73
CPSF4-209ENST00000465132 ADAMTS3O15072 1205 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms