RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 PDLIM2Q96JY6 352 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 DMRTB1Q96MA1 342 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 P2RX7Q99572 595 aaKnown RBP6.57□□□□□ -1.36
CMTM1-207ENST00000465057 PAGR1Q9BTK6 254 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 HTATIP2Q9BUP3 242 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 WDR18Q9BV38 432 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 RUSC1Q9BVN2 902 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 NIF3L1Q9GZT8 377 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.57□□□□□ -1.36
CMTM1-207ENST00000465057 DNAJC25Q9H1X3 360 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 TSPY26PQ9H489 355 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 TMOD4Q9NZQ9 345 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 GJD2Q9UKL4 321 aa6.57□□□□□ -1.36
CMTM1-207ENST00000465057 UNC80Q8N2C7 3258 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 ZNF236Q9UL36 1845 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 DHX15O43143 795 aaKnown RBP6.56□□□□□ -1.36
CMTM1-207ENST00000465057 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
CMTM1-207ENST00000465057 RAB11FIP3O75154 756 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 HMGCRP04035 888 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 FSTP19883 344 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 GTF2F1P35269 517 aaKnown RBP eCLIP6.56□□□□□ -1.36
CMTM1-207ENST00000465057 GRIA4P48058 902 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 TTF1Q15361 905 aaPredicted RBP6.56□□□□□ -1.36
CMTM1-207ENST00000465057 ANKRD34AQ69YU3 496 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 GAS2L3Q86XJ1 694 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 FOXP4Q8IVH2 680 aaPredicted RBP6.56□□□□□ -1.36
CMTM1-207ENST00000465057 EDC3Q96F86 508 aaKnown RBP6.56□□□□□ -1.36
CMTM1-207ENST00000465057 RIOK1Q9BRS2 568 aaKnown RBP6.56□□□□□ -1.36
CMTM1-207ENST00000465057 PORCNQ9H237 461 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 NPHS2Q9NP85 383 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 CALCOCO1Q9P1Z2 691 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 MORF4L1Q9UBU8 362 aa6.56□□□□□ -1.36
CMTM1-207ENST00000465057 GREB1LQ9C091 1923 aaPredicted RBP6.56□□□□□ -1.36
CMTM1-207ENST00000465057 LTBP2Q14767 1821 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 RPTORQ8N122 1335 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 C19orf81C9J6K1 198 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 EIF1AYO14602 144 aaKnown RBP6.55□□□□□ -1.36
CMTM1-207ENST00000465057 CNMDO75829 334 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 HOXA7P31268 230 aaPredicted RBP6.55□□□□□ -1.36
CMTM1-207ENST00000465057 SHMT1P34896 483 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 DDIT3P35638 169 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 MCM2P49736 904 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 PLCD1P51178 756 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 ERVK-24P63145 666 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 CBX1P83916 185 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 MAP3K12Q12852 859 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 CCL14Q16627 93 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 SPRED3Q2MJR0 410 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 LRRFIP1Q32MZ4 808 aaKnown RBP6.55□□□□□ -1.36
CMTM1-207ENST00000465057 ARTNQ5T4W7 220 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 TATDN1Q6P1N9 297 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 C7orf61Q8IZ16 206 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 ACER1Q8TDN7 264 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 SDR42E1Q8WUS8 393 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
CMTM1-207ENST00000465057 CCDC74AQ96AQ1 378 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 MYRFLQ96LU7 910 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 CLEC4MQ9H2X3 399 aaPredicted RBP6.55□□□□□ -1.36
CMTM1-207ENST00000465057 PRO3102Q9H379 93 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 OGFRQ9NZT2 677 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 CGNQ9P2M7 1197 aaKnown RBP6.55□□□□□ -1.36
CMTM1-207ENST00000465057 RBPJLQ9UBG7 517 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 STOML1Q9UBI4 398 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 SERPINB13Q9UIV8 391 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 RNF112Q9ULX5 631 aa6.55□□□□□ -1.36
CMTM1-207ENST00000465057 PFASO15067 1338 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 ZNF532Q9HCE3 1301 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 SMCHD1A6NHR9 2005 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 LOC100289279A0A1B0GTE1 492 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 SMIM22K7EJ46 135 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 GOLIM4O00461 696 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 SART1O43290 800 aaKnown RBP6.54□□□□□ -1.36
CMTM1-207ENST00000465057 CDC45O75419 566 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 CHGBP05060 677 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 CYP2D6P10635 497 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 PDE6AP16499 860 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 ZKSCAN1P17029 563 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-207ENST00000465057 ZSCAN20P17040 1043 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-207ENST00000465057 SYN1P17600 705 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 VCAM1P19320 739 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 MCCP23508 829 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 CCND3P30281 292 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-207ENST00000465057 GUCY1A2P33402 732 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 GSTM4Q03013 218 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 PCDH1Q08174 1060 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 SYCP1Q15431 976 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 ZNF423Q2M1K9 1284 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 ABCB5Q2M3G0 1257 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 CERKLQ49MI3 558 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-207ENST00000465057 BMP2KLQ5H9B9 411 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 WDR78Q5VTH9 848 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 GPR142Q7Z601 462 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 NECAB2Q7Z6G3 386 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 CLEC10AQ8IUN9 316 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 SIRT2Q8IXJ6 389 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 LCORLQ8N3X6 602 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 SLC44A5Q8NCS7 719 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 GPRC5AQ8NFJ5 357 aa6.54□□□□□ -1.36
CMTM1-207ENST00000465057 SOCS4Q8WXH5 440 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms