RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 KIAA0825Q8IV33 1275 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 NEK9Q8TD19 979 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 COG1Q8WTW3 980 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 RHOXF2Q9BQY4 288 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 CRACR2AQ9BSW2 395 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 MKNK1Q9BUB5 465 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 KCTD10Q9H3F6 313 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 ZSWIM4Q9H7M6 989 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 ARHGEF10LQ9HCE6 1279 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 KCNQ5Q9NR82 932 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 OLFML3Q9NRN5 406 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 TYW1Q9NV66 732 aaKnown RBP9.36□□□□□ -0.91
ACTB-208ENST00000464611 TMOD2Q9NZR1 351 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 ARMCX3Q9UH62 379 aaPredicted RBP9.36□□□□□ -0.91
ACTB-208ENST00000464611 ADAM21Q9UKJ8 722 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 PCDHA2Q9Y5H9 948 aa9.36□□□□□ -0.91
ACTB-208ENST00000464611 ATAD5Q96QE3 1844 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 ADAMTSL1Q8N6G6 1762 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 MYH4Q9Y623 1939 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 LRRC53A6NM62 1247 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 F8W031 263 aaPredicted RBP9.35□□□□□ -0.91
ACTB-208ENST00000464611 DDNO94850 711 aaPredicted RBP9.35□□□□□ -0.91
ACTB-208ENST00000464611 AFPP02771 609 aaKnown RBP9.35□□□□□ -0.91
ACTB-208ENST00000464611 RFX1P22670 979 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 NPEPPSP55786 919 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 SNRPFP62306 86 aaKnown RBP9.35□□□□□ -0.91
ACTB-208ENST00000464611 VSNL1P62760 191 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 ATP2B2Q01814 1243 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 ALCAMQ13740 583 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 PPP2R5EQ16537 467 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 LEKR1Q6ZMV7 388 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 GBP6Q6ZN66 633 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 KCTD1Q719H9 257 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 EPM2AIP1Q7L775 607 aaPredicted RBP9.35□□□□□ -0.91
ACTB-208ENST00000464611 KRT26Q7Z3Y9 468 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 FAM160B2Q86V87 743 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 CREG2Q8IUH2 290 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 IFT20Q8IY31 132 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 ETNPPLQ8TBG4 499 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 TMEM174Q8WUU8 243 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 PBKQ96KB5 322 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 PNKPQ96T60 521 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 MMS19Q96T76 1030 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 WDR11Q9BZH6 1224 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 LACRTQ9GZZ8 138 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 DEFB129Q9H1M3 183 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 GOPCQ9HD26 462 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 FAM207AQ9NSI2 230 aaPredicted RBP9.35□□□□□ -0.91
ACTB-208ENST00000464611 GINM1Q9NU53 330 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 MAP3K20Q9NYL2 800 aaKnown RBP9.35□□□□□ -0.91
ACTB-208ENST00000464611 GPRC5DQ9NZD1 345 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 HACL1Q9UJ83 578 aa9.35□□□□□ -0.91
ACTB-208ENST00000464611 DIS3Q9Y2L1 958 aaKnown RBP9.35□□□□□ -0.91
ACTB-208ENST00000464611 A0A0A6YYK5 440 aaPredicted RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 POLR3GO15318 223 aaPredicted RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 TBCAO75347 108 aaKnown RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 FLOT1O75955 427 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 SSBP05455 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
ACTB-208ENST00000464611 MAPTP10636 758 aaKnown RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 EPB41P11171 864 aaKnown RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 XRCC5P13010 732 aaKnown RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 ZNF76P36508 570 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 PRKCIP41743 596 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 SCNN1DP51172 638 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 EPHB4P54760 987 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 ZNF280AP59817 542 aaPredicted RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 KCNMA1Q12791 1236 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 GIT2Q14161 759 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 ASIC2Q16515 512 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 UBE2SQ16763 222 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 TDRD12Q587J7 1177 aaKnown RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 HGSNATQ68CP4 663 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 NCAPH2Q6IBW4 605 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 SYCE1Q8N0S2 351 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 C1orf131Q8NDD1 294 aaKnown RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 SLC17A8Q8NDX2 589 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 SPATA4Q8NEY3 305 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 SCFD1Q8WVM8 642 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 TAF4BQ92750 862 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 RNF166Q96A37 237 aaPredicted RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 OSBPL9Q96SU4 736 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 GMLQ99445 158 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 NUDT12Q9BQG2 462 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 SELENOOQ9BVL4 669 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 ADARB2Q9NS39 739 aaKnown RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 ODF2LQ9ULJ1 636 aa9.34□□□□□ -0.91
ACTB-208ENST00000464611 MRPL11Q9Y3B7 192 aaKnown RBP9.34□□□□□ -0.91
ACTB-208ENST00000464611 SRCAPQ6ZRS2 3230 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 A0A0U1RQJ8 604 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 MACROD2A1Z1Q3 448 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 GOLGA8KD6RF30 607 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 E9PMD0 336 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 ENC1O14682 589 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 TBC1D12O60347 775 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 ABL1P00519 1130 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 FERP16591 822 aa9.33□□□□□ -0.92
ACTB-208ENST00000464611 NR2F2P24468 414 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms