RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 POTEBQ6S5H4 581 aa25.07■■□□□ 1.6
UBA3-206ENST00000464605 PIK3AP1Q6ZUJ8 805 aa25.07■■□□□ 1.6
UBA3-206ENST00000464605 ZSCAN31Q96LW9 406 aaPredicted RBP25.07■■□□□ 1.6
UBA3-206ENST00000464605 TRPC6Q9Y210 931 aa25.07■■□□□ 1.6
UBA3-206ENST00000464605 YBX2Q9Y2T7 364 aaKnown RBP25.07■■□□□ 1.6
UBA3-206ENST00000464605 SLC37A4O43826 429 aa25.06■■□□□ 1.6
UBA3-206ENST00000464605 ATP2A2P16615 1042 aaKnown RBP25.06■■□□□ 1.6
UBA3-206ENST00000464605 RABGGTBP53611 331 aa25.06■■□□□ 1.6
UBA3-206ENST00000464605 MGAT3Q09327 533 aa25.06■■□□□ 1.6
UBA3-206ENST00000464605 LETM2Q2VYF4 491 aa25.06■■□□□ 1.6
UBA3-206ENST00000464605 PDXDC2PQ6P474 469 aa25.06■■□□□ 1.6
UBA3-206ENST00000464605 ATP8B4Q8TF62 1192 aa25.06■■□□□ 1.6
UBA3-206ENST00000464605 UNC45AQ9H3U1 944 aa25.06■■□□□ 1.6
UBA3-206ENST00000464605 ZBTB42B2RXF5 422 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 MMP1P03956 469 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 PSAPP07602 524 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 KRT2P35908 639 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 WDR5P61964 334 aaKnown RBP25.05■■□□□ 1.6
UBA3-206ENST00000464605 RABEP1Q15276 862 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 PLEKHG4Q58EX7 1191 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 LRCH2Q5VUJ6 765 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 KRT40Q6A162 431 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 PPP4R3AQ6IN85 833 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 NEK8Q86SG6 692 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 DBF4BQ8NFT6 615 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 PHOSPHO2Q8TCD6 241 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 DNAJB3Q8WWF6 145 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 LLPHQ9BRT6 129 aaKnown RBP25.05■■□□□ 1.6
UBA3-206ENST00000464605 DISC1Q9NRI5 854 aa25.05■■□□□ 1.6
UBA3-206ENST00000464605 DDX25Q9UHL0 483 aaKnown RBP25.05■■□□□ 1.6
UBA3-206ENST00000464605 WDR64B1ANS9 1081 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 BTBD18B2RXH4 712 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 HBP1O60381 514 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 GAS7O60861 476 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 MYOGP15173 224 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 TNPO1Q92973 898 aaKnown RBP25.04■■□□□ 1.6
UBA3-206ENST00000464605 SLC9A7Q96T83 725 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 TEKT3Q9BXF9 490 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 KCNMB3Q9NPA1 279 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 SH2B1Q9NRF2 756 aaPredicted RBP25.04■■□□□ 1.6
UBA3-206ENST00000464605 GABBR1Q9UBS5 961 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 PCDHA2Q9Y5H9 948 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 IGSF9BQ9UPX0 1349 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 UNC80Q8N2C7 3258 aa25.04■■□□□ 1.6
UBA3-206ENST00000464605 ABHD14A-ACY1A0A1B0GW23 586 aa25.03■■□□□ 1.6
UBA3-206ENST00000464605 FOSBP53539 338 aa25.03■■□□□ 1.6
UBA3-206ENST00000464605 RAB30Q15771 203 aa25.03■■□□□ 1.6
UBA3-206ENST00000464605 MTHFD1LQ6UB35 978 aa25.03■■□□□ 1.6
UBA3-206ENST00000464605 TBC1D32Q96NH3 1257 aa25.03■■□□□ 1.6
UBA3-206ENST00000464605 PCDHA11Q9Y5I1 949 aa25.03■■□□□ 1.6
UBA3-206ENST00000464605 ZNF862O60290 1169 aa25.02■■□□□ 1.6
UBA3-206ENST00000464605 DEFB103AP81534 67 aa25.02■■□□□ 1.6
UBA3-206ENST00000464605 DIS3L2Q8IYB7 885 aaKnown RBP25.02■■□□□ 1.6
UBA3-206ENST00000464605 NKX2-4Q9H2Z4 354 aa25.02■■□□□ 1.6
UBA3-206ENST00000464605 MSRAQ9UJ68 235 aa25.02■■□□□ 1.6
UBA3-206ENST00000464605 SAMM50Q9Y512 469 aa25.02■■□□□ 1.6
UBA3-206ENST00000464605 COL1A2P08123 1366 aa25.02■■□□□ 1.6
UBA3-206ENST00000464605 CHMP2AO43633 222 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 CD2BP2O95400 341 aaKnown RBP25.01■■□□□ 1.59
UBA3-206ENST00000464605 GCFC2P16383 781 aaKnown RBP25.01■■□□□ 1.59
UBA3-206ENST00000464605 KLRC1P26715 233 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 SFNP31947 248 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 IKBKEQ14164 716 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 UGCGQ16739 394 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 ZNF484Q5JVG2 852 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 TMCO2Q7Z6W1 182 aaPredicted RBP25.01■■□□□ 1.59
UBA3-206ENST00000464605 HERC6Q8IVU3 1022 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 BBXQ8WY36 941 aaPredicted RBP25.01■■□□□ 1.59
UBA3-206ENST00000464605 HAS1Q92839 578 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 COL25A1Q9BXS0 654 aaPredicted RBP25.01■■□□□ 1.59
UBA3-206ENST00000464605 TCEAL9Q9UHQ7 104 aa25.01■■□□□ 1.59
UBA3-206ENST00000464605 SMIM35A0A1B0GVV1 85 aa25■■□□□ 1.59
UBA3-206ENST00000464605 WNT7AO00755 349 aa25■■□□□ 1.59
UBA3-206ENST00000464605 CCNT1O60563 726 aaKnown RBP25■■□□□ 1.59
UBA3-206ENST00000464605 JAK3P52333 1124 aa25■■□□□ 1.59
UBA3-206ENST00000464605 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25■■□□□ 1.59
UBA3-206ENST00000464605 RSPH3Q86UC2 560 aa25■■□□□ 1.59
UBA3-206ENST00000464605 RDM1Q8NG50 284 aa25■■□□□ 1.59
UBA3-206ENST00000464605 FAM49AQ9H0Q0 323 aaPredicted RBP25■■□□□ 1.59
UBA3-206ENST00000464605 BRMS1Q9HCU9 246 aa25■■□□□ 1.59
UBA3-206ENST00000464605 VAV3Q9UKW4 847 aa25■■□□□ 1.59
UBA3-206ENST00000464605 CDY2AQ9Y6F7 541 aa25■■□□□ 1.59
UBA3-206ENST00000464605 TTC3P53804 2025 aa25■■□□□ 1.59
UBA3-206ENST00000464605 REV3LO60673 3130 aa24.99■■□□□ 1.59
UBA3-206ENST00000464605 MRPS6P82932 125 aaKnown RBP24.99■■□□□ 1.59
UBA3-206ENST00000464605 GUCY1B3Q02153 619 aa24.99■■□□□ 1.59
UBA3-206ENST00000464605 LPIN1Q14693 890 aa24.99■■□□□ 1.59
UBA3-206ENST00000464605 FAM20AQ96MK3 541 aa24.99■■□□□ 1.59
UBA3-206ENST00000464605 UPF2Q9HAU5 1272 aaKnown RBP24.99■■□□□ 1.59
UBA3-206ENST00000464605 EML1O00423 815 aa24.98■■□□□ 1.59
UBA3-206ENST00000464605 EFCAB14O75071 495 aa24.98■■□□□ 1.59
UBA3-206ENST00000464605 STBD1O95210 358 aa24.98■■□□□ 1.59
UBA3-206ENST00000464605 C22orf31O95567 290 aa24.98■■□□□ 1.59
UBA3-206ENST00000464605 RPLP2P05387 115 aaKnown RBP24.98■■□□□ 1.59
UBA3-206ENST00000464605 KCNJ6P48051 423 aa24.98■■□□□ 1.59
UBA3-206ENST00000464605 TRIM29Q14134 588 aa24.98■■□□□ 1.59
UBA3-206ENST00000464605 FBXO47Q5MNV8 452 aa24.98■■□□□ 1.59
UBA3-206ENST00000464605 TRMT1LQ7Z2T5 733 aaKnown RBP24.98■■□□□ 1.59
UBA3-206ENST00000464605 MIER3Q7Z3K6 550 aa24.98■■□□□ 1.59
UBA3-206ENST00000464605 POTEDQ86YR6 584 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms