RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 PSMC5P62195 406 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 PPFIA1Q13136 1202 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 CTTNQ14247 550 aaKnown RBP21.27■■□□□ 1
LMNB1-204ENST00000463908 GRIK4Q16099 956 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 DTHD1Q6ZMT9 781 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 IGSF22Q8N9C0 903 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 TRAPPC12Q8WVT3 735 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 BBXQ8WY36 941 aaPredicted RBP21.27■■□□□ 1
LMNB1-204ENST00000463908 ZBTB10Q96DT7 871 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 TFIP11Q9UBB9 837 aaKnown RBP21.27■■□□□ 1
LMNB1-204ENST00000463908 TRPC6Q9Y210 931 aa21.27■■□□□ 1
LMNB1-204ENST00000463908 H0YGN5 161 aa21.26■□□□□ 0.99
LMNB1-204ENST00000463908 SPATA31C1P0DKV0 1188 aa21.26■□□□□ 0.99
LMNB1-204ENST00000463908 CEBPZQ03701 1054 aaKnown RBP21.26■□□□□ 0.99
LMNB1-204ENST00000463908 CKAP2LQ8IYA6 745 aa21.26■□□□□ 0.99
LMNB1-204ENST00000463908 DHX38Q92620 1227 aaKnown RBP21.26■□□□□ 0.99
LMNB1-204ENST00000463908 ATP6V0A1Q93050 837 aa21.26■□□□□ 0.99
LMNB1-204ENST00000463908 WNT8BQ93098 351 aa21.26■□□□□ 0.99
LMNB1-204ENST00000463908 PRDM5Q9NQX1 630 aaPredicted RBP21.26■□□□□ 0.99
LMNB1-204ENST00000463908 RBM19Q9Y4C8 960 aaKnown RBP21.26■□□□□ 0.99
LMNB1-204ENST00000463908 MBLAC1A4D2B0 266 aaPredicted RBP21.25■□□□□ 0.99
LMNB1-204ENST00000463908 TMEM150BA6NC51 233 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 ZBTB39O15060 712 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 OATP04181 439 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 ANP32AP39687 249 aaKnown RBP21.25■□□□□ 0.99
LMNB1-204ENST00000463908 IGBP1P78318 339 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 PRKCEQ02156 737 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 CYP4A11Q02928 519 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 FOXD4L6Q3SYB3 417 aaPredicted RBP21.25■□□□□ 0.99
LMNB1-204ENST00000463908 ARL6IP4Q66PJ3 421 aaKnown RBP21.25■□□□□ 0.99
LMNB1-204ENST00000463908 FOXD4L3Q6VB84 417 aaPredicted RBP21.25■□□□□ 0.99
LMNB1-204ENST00000463908 SERINC5Q86VE9 423 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 TPH2Q8IWU9 490 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 NIFKQ9BYG3 293 aaKnown RBP21.25■□□□□ 0.99
LMNB1-204ENST00000463908 NRBP2Q9NSY0 501 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 DAXXQ9UER7 740 aaPredicted RBP21.25■□□□□ 0.99
LMNB1-204ENST00000463908 LRWD1Q9UFC0 647 aa21.25■□□□□ 0.99
LMNB1-204ENST00000463908 A0A087WWV3 80 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 RRN3P2A6NIE6 340 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 PP2D1A8MPX8 630 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 MED24O75448 989 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 GNAT1P11488 350 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 CDC25AP30304 524 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 GRIN1Q05586 938 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 PTK7Q13308 1070 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 TMEM266Q2M3C6 531 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 TRIM71Q2Q1W2 868 aaKnown RBP21.24■□□□□ 0.99
LMNB1-204ENST00000463908 XKR3Q5GH77 459 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 ZNF484Q5JVG2 852 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 ANO5Q75V66 913 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 CATSPER3Q86XQ3 398 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 C4orf19Q8IY42 314 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 CEP89Q96ST8 783 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 LXNQ9BS40 222 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 NOC4LQ9BVI4 516 aaKnown RBP21.24■□□□□ 0.99
LMNB1-204ENST00000463908 ZSWIM4Q9H7M6 989 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 CEP131Q9UPN4 1083 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 UMODL1Q5DID0 1318 aa21.24■□□□□ 0.99
LMNB1-204ENST00000463908 VWA3AA6NCI4 1184 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 DDX11L8A8MPP1 907 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 BMP15O95972 392 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 TIMP1P01033 207 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 NASPP49321 788 aaPredicted RBP21.23■□□□□ 0.99
LMNB1-204ENST00000463908 SLC39A14Q15043 492 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 TARBP2Q15633 366 aaKnown RBP21.23■□□□□ 0.99
LMNB1-204ENST00000463908 ECM1Q16610 540 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 MTHFD1LQ6UB35 978 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 RUFY4Q6ZNE9 571 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 ZNF579Q8NAF0 562 aaKnown RBP21.23■□□□□ 0.99
LMNB1-204ENST00000463908 TNPO1Q92973 898 aaKnown RBP21.23■□□□□ 0.99
LMNB1-204ENST00000463908 CHAMP1Q96JM3 812 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 FAM167AQ96KS9 214 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 SH2D3AQ9BRG2 576 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 MMTAG2Q9BU76 263 aaKnown RBP21.23■□□□□ 0.99
LMNB1-204ENST00000463908 POLR3CQ9BUI4 534 aaPredicted RBP21.23■□□□□ 0.99
LMNB1-204ENST00000463908 NOD1Q9Y239 953 aa21.23■□□□□ 0.99
LMNB1-204ENST00000463908 LYPLA2O95372 231 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 KLRC1P26715 233 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 RPA1P27694 616 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 MARCKSP29966 332 aaPredicted RBP21.22■□□□□ 0.99
LMNB1-204ENST00000463908 CYP2C18P33260 490 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 NEK9Q8TD19 979 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 ZNF396Q96N95 335 aaPredicted RBP21.22■□□□□ 0.99
LMNB1-204ENST00000463908 PPP1R12CQ9BZL4 782 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 HIPK3Q9H422 1215 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 TUBE1Q9UJT0 475 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 FBXO2Q9UK22 296 aaPredicted RBP21.22■□□□□ 0.99
LMNB1-204ENST00000463908 COL1A2P08123 1366 aa21.22■□□□□ 0.99
LMNB1-204ENST00000463908 RBAK-RBAKDNI3L0D1 243 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 RAG1P15918 1043 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 NPEPPSP55786 919 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 DNM1Q05193 864 aaKnown RBP21.21■□□□□ 0.99
LMNB1-204ENST00000463908 LINC00301Q8NCQ3 95 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 BADQ92934 168 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 TUFT1Q9NNX1 390 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 PRKAG2Q9UGJ0 569 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 PCDHA2Q9Y5H9 948 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 MORC2Q9Y6X9 1032 aaPredicted RBP21.21■□□□□ 0.99
LMNB1-204ENST00000463908 WDR81Q562E7 1941 aa21.21■□□□□ 0.99
LMNB1-204ENST00000463908 DKC1O60832 514 aaKnown RBP eCLIP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms