RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 MYO3AQ8NEV4 1616 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 DAGLAQ9Y4D2 1042 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 KRT1P04264 644 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 TCP1P17987 556 aaKnown RBP13.87□□□□□ -0.19
NUP58-206ENST00000463407 SFNP31947 248 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 ARHGAP4P98171 946 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 EHHADHQ08426 723 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 GSG1L2A8MUP6 293 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 CIITAP33076 1130 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 ANKRD42Q8N9B4 389 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 LY9Q9HBG7 655 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
NUP58-206ENST00000463407 RGS16O15492 202 aaPredicted RBP13.87□□□□□ -0.19
NUP58-206ENST00000463407 CELF2O95319 508 aaKnown RBP13.87□□□□□ -0.19
NUP58-206ENST00000463407 S100BP04271 92 aaPredicted RBP13.87□□□□□ -0.19
NUP58-206ENST00000463407 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 CCDC13Q8IYE1 715 aa13.87□□□□□ -0.19
NUP58-206ENST00000463407 PHLPP2Q6ZVD8 1323 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 DYNLT1P63172 113 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 PARK7Q99497 189 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 OSBPL5Q9H0X9 879 aaPredicted RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 ACTN1P12814 892 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 GARSP41250 739 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 ECE1P42892 770 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 SF3B3Q15393 1217 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 ZNF667Q5HYK9 610 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 PSPC1Q8WXF1 523 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 GPC3P51654 580 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 ZNF449Q6P9G9 518 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 GCOM2Q9BZD3 368 aaPredicted RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 MRPL47Q9HD33 250 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 UBN1Q9NPG3 1134 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 KBTBD13C9JR72 458 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 DPYSL4O14531 572 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 SLC16A4O15374 487 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 PRPSAP2O60256 369 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 GSTA1P08263 222 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 GSTA2P09210 222 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 ZNF18P17022 549 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 TSPY1Q01534 308 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 TRIM28Q13263 835 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 COG2Q14746 738 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 BEST2Q8NFU1 509 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 TSC1Q92574 1164 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 RILPQ96NA2 401 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 RFX7Q2KHR2 1363 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 CCDC160A6NGH7 325 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 EIF3CLB5ME19 914 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 SCN4BQ8IWT1 228 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 ZNF280CQ8ND82 737 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 PPP4R1Q8TF05 950 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 EIF3CQ99613 913 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 MYOZ2Q9NPC6 264 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 SAMSN1Q9NSI8 373 aaKnown RBP13.86□□□□□ -0.19
NUP58-206ENST00000463407 NEXMIFQ5QGS0 1516 aa13.86□□□□□ -0.19
NUP58-206ENST00000463407 STK36Q9NRP7 1315 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 TECPR2O15040 1411 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 FAM20AQ96MK3 541 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 CCNE1P24864 410 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 ARL13BQ3SXY8 428 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 RESP18Q5W5W9 173 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 CCDC62Q6P9F0 684 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 BBOF1Q8ND07 529 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 PPP1R13BQ96KQ4 1090 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 PIDD1Q9HB75 910 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 YWHAGP61981 247 aaKnown RBP eCLIP13.85□□□□□ -0.19
NUP58-206ENST00000463407 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 CDKL2Q92772 493 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 POLR3FQ9H1D9 316 aaPredicted RBP13.85□□□□□ -0.19
NUP58-206ENST00000463407 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.85□□□□□ -0.19
NUP58-206ENST00000463407 NRBP1Q9UHY1 535 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 SCAF8Q9UPN6 1271 aaKnown RBP13.85□□□□□ -0.19
NUP58-206ENST00000463407 PNPLA6Q8IY17 1366 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 DIP2AQ14689 1571 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 A6NNZ2 444 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 HUS1O60921 280 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 P4HBP07237 508 aaKnown RBP13.85□□□□□ -0.19
NUP58-206ENST00000463407 TUBB8Q3ZCM7 444 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 NXNQ6DKJ4 435 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
NUP58-206ENST00000463407 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 BUB1BO60566 1050 aaPredicted RBP13.85□□□□□ -0.19
NUP58-206ENST00000463407 IGSF3O75054 1194 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 ATP11AP98196 1134 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 CDC42EP5Q6NZY7 148 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 C2orf40Q9H1Z8 148 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 PIK3C2BO00750 1634 aa13.85□□□□□ -0.19
NUP58-206ENST00000463407 TXNP10599 105 aaKnown RBP13.84□□□□□ -0.19
NUP58-206ENST00000463407 QARSP47897 775 aaKnown RBP13.84□□□□□ -0.19
NUP58-206ENST00000463407 HUNKP57058 714 aa13.84□□□□□ -0.19
NUP58-206ENST00000463407 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
NUP58-206ENST00000463407 MB21D2Q8IYB1 491 aaPredicted RBP13.84□□□□□ -0.19
NUP58-206ENST00000463407 CALN1Q9BXU9 219 aa13.84□□□□□ -0.19
NUP58-206ENST00000463407 GJB4Q9NTQ9 266 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms