RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ZMYM2Q9UBW7 1377 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 FAM13AO94988 1023 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 MAP3K9P80192 1104 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 MEA1Q16626 185 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 BMT2Q1RMZ1 405 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 KCTD17Q8N5Z5 321 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 L2HGDHQ9H9P8 463 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 A1CFQ9NQ94 594 aaKnown RBP14.15□□□□□ -0.14
VAPB-203ENST00000463370 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.15□□□□□ -0.14
VAPB-203ENST00000463370 V9GYY5 206 aaPredicted RBP14.15□□□□□ -0.14
VAPB-203ENST00000463370 PARP14Q460N5 1801 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 TGFB1I1O43294 461 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 RGS20O76081 388 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 NDUFA10O95299 355 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 ZNF131P52739 623 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 ZBED6P86452 979 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 MAPK7Q13164 816 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 EDRF1Q3B7T1 1238 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 VSIG10LQ86VR7 867 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 RETREG2Q8NC44 543 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 DCPSQ96C86 337 aaKnown RBP14.14□□□□□ -0.15
VAPB-203ENST00000463370 CLMNQ96JQ2 1002 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 NUP58Q9BVL2 599 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 TEX13BQ9BXU2 312 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 PARVGQ9HBI0 331 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 CYP39A1Q9NYL5 469 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 EPN1Q9Y6I3 576 aaPredicted RBP14.14□□□□□ -0.15
VAPB-203ENST00000463370 GOLGA6L9A6NEM1 432 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 CLIC2O15247 247 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 AKAP3O75969 853 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 KIF20AO95235 890 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 P4HBP07237 508 aaKnown RBP14.14□□□□□ -0.15
VAPB-203ENST00000463370 NR3C2P08235 984 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 PLEKP08567 350 aaPredicted RBP14.14□□□□□ -0.15
VAPB-203ENST00000463370 MUTP22033 750 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 ARHGAP25P42331 645 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 CASP4P49662 377 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 OAZ1P54368 228 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 MARSP56192 900 aaKnown RBP14.14□□□□□ -0.15
VAPB-203ENST00000463370 NCBP1Q09161 790 aaKnown RBP14.14□□□□□ -0.15
VAPB-203ENST00000463370 FIGNQ5HY92 759 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 SH3D19Q5HYK7 790 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 SULF1Q8IWU6 871 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 TRIM10Q9UDY6 481 aa14.14□□□□□ -0.15
VAPB-203ENST00000463370 SBF1O95248 1867 aa14.13□□□□□ -0.15
VAPB-203ENST00000463370 A0A1W2PQJ5 194 aa14.13□□□□□ -0.15
VAPB-203ENST00000463370 ARHGEF35A5YM69 484 aa14.13□□□□□ -0.15
VAPB-203ENST00000463370 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
VAPB-203ENST00000463370 HIP1RO75146 1068 aa14.13□□□□□ -0.15
VAPB-203ENST00000463370 PADI6Q6TGC4 694 aa14.13□□□□□ -0.15
VAPB-203ENST00000463370 SAMD3Q8N6K7 520 aa14.13□□□□□ -0.15
VAPB-203ENST00000463370 ZSWIM4Q9H7M6 989 aa14.13□□□□□ -0.15
VAPB-203ENST00000463370 DICER1Q9UPY3 1922 aaKnown RBP14.13□□□□□ -0.15
VAPB-203ENST00000463370 PDXKO00764 312 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 CETN3O15182 167 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 GAP43P17677 238 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 FSTL1Q12841 308 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 UTP14CQ5TAP6 766 aaKnown RBP14.12□□□□□ -0.15
VAPB-203ENST00000463370 ZNF720Q7Z2F6 126 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 ELP3Q9H9T3 547 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 TBC1D22BQ9NU19 505 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 PNMA2Q9UL42 364 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.12□□□□□ -0.15
VAPB-203ENST00000463370 IRF6O14896 467 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 SORBS3O60504 671 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 NOL4O94818 638 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 GNA14O95837 355 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 NR3C1P04150 777 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 TUBB4AP04350 444 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 GUCY2CP25092 1073 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 QARSP47897 775 aaKnown RBP14.12□□□□□ -0.15
VAPB-203ENST00000463370 RARRES1P49788 294 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 HERVK_113P62684 666 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 ODR4Q5SWX8 454 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 NEK9Q8TD19 979 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 BAP1Q92560 729 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 R3HDMLQ9H3Y0 253 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 ACAD9Q9H845 621 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 NHEJ1Q9H9Q4 299 aaPredicted RBP14.12□□□□□ -0.15
VAPB-203ENST00000463370 TYW1Q9NV66 732 aaKnown RBP14.12□□□□□ -0.15
VAPB-203ENST00000463370 HOXC10Q9NYD6 342 aa14.12□□□□□ -0.15
VAPB-203ENST00000463370 COL11A1P12107 1806 aaPredicted RBP14.12□□□□□ -0.15
VAPB-203ENST00000463370 POLR2AP24928 1970 aaKnown RBP14.12□□□□□ -0.15
VAPB-203ENST00000463370 LRRC53A6NM62 1247 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 URI1O94763 535 aaPredicted RBP14.11□□□□□ -0.15
VAPB-203ENST00000463370 CCND2P30279 289 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 YWHABP31946 246 aaKnown RBP14.11□□□□□ -0.15
VAPB-203ENST00000463370 FAM178BQ8IXR5 827 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 INPP4AQ96PE3 977 aaPredicted RBP14.11□□□□□ -0.15
VAPB-203ENST00000463370 BTBD7Q9P203 1132 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 BACH1O14867 736 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 CASQ1P31415 396 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 TSR1Q2NL82 804 aaKnown RBP14.11□□□□□ -0.15
VAPB-203ENST00000463370 PLA2G4FQ68DD2 849 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 RRAGAQ7L523 313 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 NSUN6Q8TEA1 469 aaKnown RBP14.11□□□□□ -0.15
VAPB-203ENST00000463370 OTUD5Q96G74 571 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 ARHGAP20Q9P2F6 1191 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 ODF2LQ9ULJ1 636 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms