RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PHF20Q9BVI0 1012 aa14.81□□□□□ -0.04
HDAC1-203ENST00000463172 WDR81Q562E7 1941 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 SMIM35A0A1B0GVV1 85 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 MSH4O15457 936 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 GTPBP6O43824 516 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-203ENST00000463172 MARCH6O60337 910 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 MYOGP15173 224 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 GCFC2P16383 781 aaKnown RBP14.8□□□□□ -0.04
HDAC1-203ENST00000463172 IGFBP4P22692 258 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 MARCH8Q5T0T0 291 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 MTHFD1LQ6UB35 978 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 RUFY4Q6ZNE9 571 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 CCDC60Q8IWA6 550 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-203ENST00000463172 MYOCDQ8IZQ8 938 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 FAM49AQ9H0Q0 323 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-203ENST00000463172 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
HDAC1-203ENST00000463172 DISC1Q9NRI5 854 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 NRBP2Q9NSY0 501 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 KCNJ14Q9UNX9 436 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 INSL6Q9Y581 213 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 MAFBQ9Y5Q3 323 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-203ENST00000463172 TRPV2Q9Y5S1 764 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 CDY2AQ9Y6F7 541 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 SQORQ9Y6N5 450 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 CHD9Q3L8U1 2897 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 EVPLQ92817 2033 aa14.8□□□□□ -0.04
HDAC1-203ENST00000463172 CYP3A7-CYP3A51PA0A087WV96 503 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 M0R2N6 131 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 ADAMTS3O15072 1205 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 CHRNA1P02708 482 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 CYP3A7P24462 503 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 KLRC1P26715 233 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 DEFB103AP81534 67 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 PTPRSQ13332 1948 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 TSHZ1Q6ZSZ6 1077 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 NEK8Q86SG6 692 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 ZNF710Q8N1W2 664 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 SLC5A5Q92911 643 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 LENG9Q96B70 501 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 AIFM3Q96NN9 605 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 FTHL17Q9BXU8 183 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
HDAC1-203ENST00000463172 RNF216Q9NWF9 866 aaPredicted RBP14.79□□□□□ -0.04
HDAC1-203ENST00000463172 GABBR1Q9UBS5 961 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 DDX25Q9UHL0 483 aaKnown RBP14.79□□□□□ -0.04
HDAC1-203ENST00000463172 LIMCH1Q9UPQ0 1083 aa14.79□□□□□ -0.04
HDAC1-203ENST00000463172 MAGEB2O15479 319 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 GHRP10912 638 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 TMOD1P28289 359 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 KRT2P35908 639 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 MGAT3Q09327 533 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 ME3Q16798 604 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 INF2Q27J81 1249 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 LETM2Q2VYF4 491 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 MIER3Q7Z3K6 550 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC1-203ENST00000463172 NECAB1Q8N987 351 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 IL27Q8NEV9 243 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 ZSCAN31Q96LW9 406 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-203ENST00000463172 UIMC1Q96RL1 719 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 YME1L1Q96TA2 773 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 LOXHD1Q8IVV2 1947 aa14.78□□□□□ -0.04
HDAC1-203ENST00000463172 CDH23Q9H251 3354 aa14.77□□□□□ -0.04
HDAC1-203ENST00000463172 IGSF9BQ9UPX0 1349 aa14.77□□□□□ -0.04
HDAC1-203ENST00000463172 CHMP2AO43633 222 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 DKC1O60832 514 aaKnown RBP eCLIP14.77□□□□□ -0.05
HDAC1-203ENST00000463172 BAG4O95429 457 aaKnown RBP14.77□□□□□ -0.05
HDAC1-203ENST00000463172 TDP2O95551 362 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 TAP1Q03518 808 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 PAK2Q13177 524 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 LPIN1Q14693 890 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 SAFBQ15424 915 aaKnown RBP eCLIP14.77□□□□□ -0.05
HDAC1-203ENST00000463172 FBXO47Q5MNV8 452 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 PPP4R3AQ6IN85 833 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 FAM117BQ6P1L5 589 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.77□□□□□ -0.052e-9■■□□□ 12.8
HDAC1-203ENST00000463172 TRAPPC12Q8WVT3 735 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 ARNTL2Q8WYA1 636 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 FAM20AQ96MK3 541 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 SAMD11Q96NU1 681 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 TGS1Q96RS0 853 aaKnown RBP14.77□□□□□ -0.05
HDAC1-203ENST00000463172 MAP7D2Q96T17 732 aa14.77□□□□□ -0.05
HDAC1-203ENST00000463172 CELF4Q9BZC1 486 aaKnown RBP14.77□□□□□ -0.05
HDAC1-203ENST00000463172 KDM3AQ9Y4C1 1321 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 TBX3O15119 743 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 CCNT1O60563 726 aaKnown RBP14.76□□□□□ -0.05
HDAC1-203ENST00000463172 CTDNEP1O95476 244 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 SEC24BO95487 1268 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 OATP04181 439 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 NPY5RQ15761 445 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 TCTN1Q2MV58 587 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 PIK3AP1Q6ZUJ8 805 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 METTL13Q8N6R0 699 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 TOP1MTQ969P6 601 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 MBOAT7Q96N66 472 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 UNC45AQ9H3U1 944 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 SH2B1Q9NRF2 756 aaPredicted RBP14.76□□□□□ -0.05
HDAC1-203ENST00000463172 TRANK1O15050 2925 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 SIP14410 1827 aa14.76□□□□□ -0.05
HDAC1-203ENST00000463172 PSMD10O75832 226 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms