RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PLCB4Q15147 1175 aa18■□□□□ 0.47
SND1-203ENST00000463020 NPAS4Q8IUM7 802 aa18■□□□□ 0.47
SND1-203ENST00000463020 CUL5Q93034 780 aa18■□□□□ 0.47
SND1-203ENST00000463020 PGBD1Q96JS3 809 aa18■□□□□ 0.47
SND1-203ENST00000463020 POP1Q99575 1024 aaKnown RBP18■□□□□ 0.47
SND1-203ENST00000463020 KCNH6Q9H252 994 aa18■□□□□ 0.47
SND1-203ENST00000463020 CDHR5Q9HBB8 845 aa18■□□□□ 0.47
SND1-203ENST00000463020 USP15Q9Y4E8 981 aaPredicted RBP18■□□□□ 0.47
SND1-203ENST00000463020 TCF15Q12870 199 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 COASYQ13057 564 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 TRIM67Q6ZTA4 783 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 RSPH3Q86UC2 560 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 GIMAP8Q8ND71 665 aaPredicted RBP17.99■□□□□ 0.47
SND1-203ENST00000463020 TMEM40Q8WWA1 233 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 CCDC136Q96JN2 1154 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 MFSD14AQ96MC6 490 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 SMARCAD1Q9H4L7 1026 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 PSTPIP2Q9H939 334 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 JADE2Q9NQC1 790 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 TRPV2Q9Y5S1 764 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 ZDBF2Q9HCK1 2354 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 KMT2EQ8IZD2 1858 aa17.99■□□□□ 0.47
SND1-203ENST00000463020 IGSF9BQ9UPX0 1349 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 SH2B2O14492 632 aaPredicted RBP17.98■□□□□ 0.47
SND1-203ENST00000463020 SGSM2O43147 1006 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 DDAH1O94760 285 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 SCG2P13521 617 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 ZXDAP98168 799 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 ITGB3BPQ13352 177 aaPredicted RBP17.98■□□□□ 0.47
SND1-203ENST00000463020 CBX2Q14781 532 aaPredicted RBP17.98■□□□□ 0.47
SND1-203ENST00000463020 TYW1BQ6NUM6 668 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 CTCFLQ8NI51 663 aaPredicted RBP17.98■□□□□ 0.47
SND1-203ENST00000463020 JPH1Q9HDC5 661 aaPredicted RBP17.98■□□□□ 0.47
SND1-203ENST00000463020 PCDHA6Q9UN73 950 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 PCDHA8Q9Y5H6 950 aa17.98■□□□□ 0.47
SND1-203ENST00000463020 VPS13AQ96RL7 3174 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 PRC1O43663 620 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 ARP10275 920 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 VCPP55072 806 aaKnown RBP17.97■□□□□ 0.47
SND1-203ENST00000463020 ERVFC1P60507 584 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 PAK2Q13177 524 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
SND1-203ENST00000463020 FAM102BQ5T8I3 360 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 PBXIP1Q96AQ6 731 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 MAP3K14Q99558 947 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 CELF4Q9BZC1 486 aaKnown RBP17.97■□□□□ 0.47
SND1-203ENST00000463020 KCNH7Q9NS40 1196 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 SEC63Q9UGP8 760 aaKnown RBP17.97■□□□□ 0.47
SND1-203ENST00000463020 CDH22Q9UJ99 828 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 TRPC6Q9Y210 931 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 PCDHA2Q9Y5H9 948 aa17.97■□□□□ 0.47
SND1-203ENST00000463020 RBM8AQ9Y5S9 174 aaKnown RBP17.97■□□□□ 0.47
SND1-203ENST00000463020 ZFHX2Q9C0A1 2572 aaPredicted RBP17.96■□□□□ 0.47
SND1-203ENST00000463020 ACTR2P61160 394 aa17.96■□□□□ 0.47
SND1-203ENST00000463020 AAMPQ13685 434 aa17.96■□□□□ 0.47
SND1-203ENST00000463020 BMP8AQ7Z5Y6 402 aa17.96■□□□□ 0.47
SND1-203ENST00000463020 MAP4K1Q92918 833 aa17.96■□□□□ 0.47
SND1-203ENST00000463020 CDHR1Q96JP9 859 aa17.96■□□□□ 0.47
SND1-203ENST00000463020 ERVK-5Q9HDB9 667 aa17.96■□□□□ 0.47
SND1-203ENST00000463020 FAM86C1Q9NVL1 165 aa17.96■□□□□ 0.47
SND1-203ENST00000463020 SLC9A2Q9UBY0 812 aa17.96■□□□□ 0.47
SND1-203ENST00000463020 NOC2LQ9Y3T9 749 aaKnown RBP17.96■□□□□ 0.47
SND1-203ENST00000463020 RRN3P2A6NIE6 340 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 CCNE2O96020 404 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 APOBRQ0VD83 1088 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 NAALADL2Q58DX5 795 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 IER5Q5VY09 327 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 MTHFD1LQ6UB35 978 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 ATP8B4Q8TF62 1192 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 ASIC4Q96FT7 647 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 RPGRIP1Q96KN7 1286 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 PPP1R16BQ96T49 567 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 FTHL17Q9BXU8 183 aa17.95■□□□□ 0.46
SND1-203ENST00000463020 FNDC1Q4ZHG4 1894 aaPredicted RBP17.95■□□□□ 0.46
SND1-203ENST00000463020 ZBTB42B2RXF5 422 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 ADAMTS3O15072 1205 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 PDGFBP01127 241 aaPredicted RBP17.94■□□□□ 0.46
SND1-203ENST00000463020 KIF5BP33176 963 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 SARSP49591 514 aaKnown RBP17.94■□□□□ 0.46
SND1-203ENST00000463020 WWC2Q6AWC2 1192 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 SUSD6Q92537 303 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 MXRA8Q9BRK3 442 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 APOL5Q9BWW9 433 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 GINS2Q9Y248 185 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 SQORQ9Y6N5 450 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 KDM3AQ9Y4C1 1321 aa17.94■□□□□ 0.46
SND1-203ENST00000463020 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
SND1-203ENST00000463020 FSCN2O14926 492 aa17.93■□□□□ 0.46
SND1-203ENST00000463020 FGFR1P11362 822 aa17.93■□□□□ 0.46
SND1-203ENST00000463020 SP100P23497 879 aaPredicted RBP17.93■□□□□ 0.46
SND1-203ENST00000463020 KRT76Q01546 638 aa17.93■□□□□ 0.46
SND1-203ENST00000463020 NFX1Q12986 1120 aaKnown RBP17.93■□□□□ 0.46
SND1-203ENST00000463020 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
SND1-203ENST00000463020 KIAA0319LQ8IZA0 1049 aa17.93■□□□□ 0.46
SND1-203ENST00000463020 CWH43Q9H720 699 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms