RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 POTEBQ6S5H4 581 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 SPNS2Q8IVW8 549 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 CMTR1Q8N1G2 835 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 CLP1Q92989 425 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 ZNF689Q96CS4 500 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 SLC12A7Q9Y666 1083 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 NRCAMQ92823 1304 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 SPTBN4Q9H254 2564 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 KLF18A0A0U1RQI7 1052 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 GSTTP1A0A1W2PQM5 241 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 ZBTB43O43298 467 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 TBX10O75333 385 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 GNAT1P11488 350 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 ITGB5P18084 799 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 KIF5BP33176 963 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 GTF2F1P35269 517 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 RCAN1P53805 252 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 APOBRQ0VD83 1088 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 HYAL1Q12794 435 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 PPFIA1Q13136 1202 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 CAMK1Q14012 370 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 TOB2Q14106 344 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 FBXO47Q5MNV8 452 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 XRRA1Q6P2D8 792 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 Q6ZUG5 572 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 CRIPAKQ8N1N5 446 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 FIBCD1Q8N539 461 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 FANCBQ8NB91 859 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 SMARCC2Q8TAQ2 1214 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 GPRASP2Q96D09 838 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 ZBTB10Q96DT7 871 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 IL17RAQ96F46 866 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 LZTS2Q9BRK4 669 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 TM6SF1Q9BZW5 370 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 AGO3Q9H9G7 860 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 ZSWIM6Q9HCJ5 1215 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 CLDND1Q9NY35 253 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 TUBE1Q9UJT0 475 aa9.08□□□□□ -0.96
CDC42BPA-210ENST00000462553 hCG_1642624A0A1W2PR95 340 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 GOLGA8BA8MQT2 603 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 ENPP3O14638 875 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 DCXO43602 365 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 MMP1P03956 469 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 MARK3P27448 753 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 IRS1P35568 1242 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 BMPR1AP36894 532 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 GNAQP50148 359 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 SMAD2Q15796 467 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 GRIK4Q16099 956 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 UBE2SQ16763 222 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 RTN1Q16799 776 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 C8orf34Q49A92 452 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 TAF2Q6P1X5 1199 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 TSHZ1Q6ZSZ6 1077 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 RUFY3Q7L099 469 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 ADHFE1Q8IWW8 467 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 DNAJB3Q8WWF6 145 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 BRF1Q92994 677 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 RRP36Q96EU6 259 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 PCYT2Q99447 389 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 C11orf84Q9BUA3 381 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 RBM28Q9NW13 759 aaKnown RBP9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 PRKAG3Q9UGI9 489 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 UBIAD1Q9Y5Z9 338 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 CDY2AQ9Y6F7 541 aa9.07□□□□□ -0.96
CDC42BPA-210ENST00000462553 MYO10Q9HD67 2058 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 GOLGA8AA7E2F4 631 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 LINC01565O15544 149 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 MBTPS2O43462 519 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 DGKIO75912 1065 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 RB1P06400 928 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 ALADP13716 330 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 DNAJB1P25685 340 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 PSMA5P28066 241 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 ADD1P35611 737 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 EVCP57679 992 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 CLUL1Q15846 466 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 TYW1BQ6NUM6 668 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 RTN4RL1Q86UN2 441 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 NLRX1Q86UT6 975 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 GIMAP8Q8ND71 665 aaPredicted RBP9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 CUL5Q93034 780 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 UPF3BQ9BZI7 483 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 LMAN2LQ9H0V9 348 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 ERAP1Q9NZ08 941 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 PKD2L1Q9P0L9 805 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 RWDD3Q9Y3V2 267 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 MRPL42Q9Y6G3 142 aaKnown RBP9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 FRYLO94915 3013 aa9.06□□□□□ -0.96
CDC42BPA-210ENST00000462553 DCHS1Q96JQ0 3298 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 ZFHX2Q9C0A1 2572 aaPredicted RBP9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 CSPG5O95196 566 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 CD52P31358 61 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 METAP2P50579 478 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 ANAPC15P60006 121 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 MRPS6P82932 125 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 SMAD4Q13485 552 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 MTMR1Q13613 665 aa9.05□□□□□ -0.96
CDC42BPA-210ENST00000462553 BTG3Q14201 252 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms