RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 ATP8B4Q8TF62 1192 aa18.29■□□□□ 0.52
SNX21-206ENST00000462307 DNAJB3Q8WWF6 145 aa18.29■□□□□ 0.52
SNX21-206ENST00000462307 APBB2Q92870 758 aa18.29■□□□□ 0.52
SNX21-206ENST00000462307 SLC5A5Q92911 643 aa18.29■□□□□ 0.52
SNX21-206ENST00000462307 GAS2L1Q99501 681 aaPredicted RBP18.29■□□□□ 0.52
SNX21-206ENST00000462307 RAD9AQ99638 391 aa18.29■□□□□ 0.52
SNX21-206ENST00000462307 TRPC6Q9Y210 931 aa18.29■□□□□ 0.52
SNX21-206ENST00000462307 SQORQ9Y6N5 450 aa18.29■□□□□ 0.52
SNX21-206ENST00000462307 SMIM35A0A1B0GVV1 85 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 ZBTB42B2RXF5 422 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 RBAK-RBAKDNI3L0D1 243 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 TLL1O43897 1013 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 ARHGEF15O94989 841 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 CTSHP09668 335 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 POU3F3P20264 500 aaPredicted RBP18.28■□□□□ 0.52
SNX21-206ENST00000462307 IGBP1P78318 339 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 C8orf34Q49A92 452 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 PDXDC2PQ6P474 469 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 MTHFD1LQ6UB35 978 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 B3GNT9Q6UX72 402 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 GTF3C6Q969F1 213 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 TOP1MTQ969P6 601 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 UIMC1Q96RL1 719 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 KCNJ14Q9UNX9 436 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 VCANP13611 3396 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 COL1A2P08123 1366 aa18.28■□□□□ 0.52
SNX21-206ENST00000462307 PRRC2BQ5JSZ5 2229 aaKnown RBP18.27■□□□□ 0.52
SNX21-206ENST00000462307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.27■□□□□ 0.52
SNX21-206ENST00000462307 BACH1O14867 736 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 PSMD10O75832 226 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 LARGE1O95461 756 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 PSAPP07602 524 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 XBP1P17861 261 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 ZNF484Q5JVG2 852 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 IER5Q5VY09 327 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 KRT25Q7Z3Z0 450 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 TMCO2Q7Z6W1 182 aaPredicted RBP18.27■□□□□ 0.52
SNX21-206ENST00000462307 TRAPPC12Q8WVT3 735 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
SNX21-206ENST00000462307 WASF1Q92558 559 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 ZBTB10Q96DT7 871 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 IFIH1Q9BYX4 1025 aaKnown RBP18.27■□□□□ 0.52
SNX21-206ENST00000462307 ORC3Q9UBD5 711 aaPredicted RBP18.27■□□□□ 0.52
SNX21-206ENST00000462307 CDY2AQ9Y6F7 541 aa18.27■□□□□ 0.52
SNX21-206ENST00000462307 KDM3AQ9Y4C1 1321 aa18.26■□□□□ 0.51
SNX21-206ENST00000462307 AMHP03971 560 aa18.26■□□□□ 0.51
SNX21-206ENST00000462307 KLRC1P26715 233 aa18.26■□□□□ 0.51
SNX21-206ENST00000462307 MRPS6P82932 125 aaKnown RBP18.26■□□□□ 0.51
SNX21-206ENST00000462307 HTRA4P83105 476 aaPredicted RBP18.26■□□□□ 0.51
SNX21-206ENST00000462307 LPIN1Q14693 890 aa18.26■□□□□ 0.51
SNX21-206ENST00000462307 NONOQ15233 471 aaKnown RBP eCLIP18.26■□□□□ 0.51
SNX21-206ENST00000462307 FBXO47Q5MNV8 452 aa18.26■□□□□ 0.51
SNX21-206ENST00000462307 NECAB1Q8N987 351 aa18.26■□□□□ 0.51
SNX21-206ENST00000462307 GJB4Q9NTQ9 266 aa18.26■□□□□ 0.51
SNX21-206ENST00000462307 INSL6Q9Y581 213 aa18.26■□□□□ 0.51
SNX21-206ENST00000462307 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 WDR64B1ANS9 1081 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 TDP2O95551 362 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 SFNP31947 248 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 PPP4R3AQ6IN85 833 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 FAM43BQ6ZT52 329 aaPredicted RBP18.25■□□□□ 0.51
SNX21-206ENST00000462307 USP38Q8NB14 1042 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 NSUN7Q8NE18 718 aaKnown RBP18.25■□□□□ 0.51
SNX21-206ENST00000462307 RDM1Q8NG50 284 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 ETNPPLQ8TBG4 499 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 KIF2CQ99661 725 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 DISC1Q9NRI5 854 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 GABBR1Q9UBS5 961 aa18.25■□□□□ 0.51
SNX21-206ENST00000462307 IGSF9BQ9UPX0 1349 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 GAS7O60861 476 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 DTNBO60941 627 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 GHRP10912 638 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 INF2Q27J81 1249 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 LRCH2Q5VUJ6 765 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 TSHZ1Q6ZSZ6 1077 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.24■□□□□ 0.51
SNX21-206ENST00000462307 KIAA0319LQ8IZA0 1049 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
SNX21-206ENST00000462307 OXER1Q8TDS5 423 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 TEKT3Q9BXF9 490 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 CELF4Q9BZC1 486 aaKnown RBP18.24■□□□□ 0.51
SNX21-206ENST00000462307 UNC45AQ9H3U1 944 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 AGO3Q9H9G7 860 aaKnown RBP18.24■□□□□ 0.51
SNX21-206ENST00000462307 TCEAL9Q9UHQ7 104 aa18.24■□□□□ 0.51
SNX21-206ENST00000462307 EPOPA6NHQ4 379 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 ENPP3O14638 875 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 ZNF862O60290 1169 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 JAK3P52333 1124 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 ERVK-21P61565 698 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 NEK8Q86SG6 692 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 TNFRSF25Q93038 417 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 GJA10Q969M2 543 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
SNX21-206ENST00000462307 CEP131Q9UPN4 1083 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 LIMCH1Q9UPQ0 1083 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
SNX21-206ENST00000462307 TRPV2Q9Y5S1 764 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms