RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 NEK9Q8TD19 979 aa8.78□□□□□ -1
ERCC8-204ENST00000462279 EPS8L3Q8TE67 593 aaKnown RBP8.78□□□□□ -1
ERCC8-204ENST00000462279 TLCD1Q96CP7 247 aa8.78□□□□□ -1
ERCC8-204ENST00000462279 CALML4Q96GE6 196 aa8.78□□□□□ -1
ERCC8-204ENST00000462279 PBKQ96KB5 322 aa8.78□□□□□ -1
ERCC8-204ENST00000462279 ZNF512BQ96KM6 892 aaPredicted RBP8.78□□□□□ -1
ERCC8-204ENST00000462279 UIMC1Q96RL1 719 aa8.78□□□□□ -1
ERCC8-204ENST00000462279 TSG101Q99816 390 aa8.78□□□□□ -1
ERCC8-204ENST00000462279 LBHD1Q9BQE6 289 aaPredicted RBP8.78□□□□□ -1
ERCC8-204ENST00000462279 ADAM22Q9P0K1 906 aa8.78□□□□□ -1
ERCC8-204ENST00000462279 PCDHA4Q9UN74 947 aa8.78□□□□□ -1
ERCC8-204ENST00000462279 ZBTB12Q9Y330 459 aaPredicted RBP8.78□□□□□ -1
ERCC8-204ENST00000462279 MYMKA6NI61 221 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 TSPY2A6NKD2 308 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 CCDC169A6NNP5 214 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 LUC7L3O95232 432 aaKnown RBP8.77□□□□□ -1
ERCC8-204ENST00000462279 ACTN1P12814 892 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 RAB27AP51159 221 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 PMS2P54278 862 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 COPS2P61201 443 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 GDAP1Q8TB36 358 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 IFT74Q96LB3 600 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 CPVLQ9H3G5 476 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 PIDD1Q9HB75 910 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 KCNK9Q9NPC2 374 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 MEGF6O75095 1541 aa8.77□□□□□ -1
ERCC8-204ENST00000462279 TMEM94Q12767 1356 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 LRRD1A4D1F6 860 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 SNX3O60493 162 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 NOL4O94818 638 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 FGFR4P22455 802 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 PDE6CP51160 858 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 RPS6KA3P51812 740 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 EIF3BP55884 814 aaKnown RBP8.77□□□□□ -1.01
ERCC8-204ENST00000462279 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
ERCC8-204ENST00000462279 ZHX3Q9H4I2 956 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 ETNK1Q9HBU6 452 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 FAM114A2Q9NRY5 505 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 ZMYND8Q9ULU4 1186 aaPredicted RBP8.77□□□□□ -1.01
ERCC8-204ENST00000462279 USP15Q9Y4E8 981 aaPredicted RBP8.77□□□□□ -1.01
ERCC8-204ENST00000462279 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.77□□□□□ -1.01
ERCC8-204ENST00000462279 SPDYE5A6NIY4 337 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 FOXO6A8MYZ6 492 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 RBAK-RBAKDNI3L0D1 243 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 STXBP3O00186 592 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 SUN1O94901 812 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 MMP13P45452 471 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 ZNF211Q13398 564 aaPredicted RBP8.77□□□□□ -1.01
ERCC8-204ENST00000462279 IFI16Q16666 785 aaKnown RBP8.77□□□□□ -1.01
ERCC8-204ENST00000462279 ALKBH5Q6P6C2 394 aaKnown RBP8.77□□□□□ -1.01
ERCC8-204ENST00000462279 LONP2Q86WA8 852 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 FBXO25Q8TCJ0 367 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 ACTRT1Q8TDG2 376 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 C7orf25Q9BPX7 421 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 ADAM7Q9H2U9 754 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 SEMA4AQ9H3S1 761 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 ARAP2Q8WZ64 1704 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 LRP6O75581 1613 aa8.77□□□□□ -1.01
ERCC8-204ENST00000462279 CCDC188H7C350 402 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 DDAH1O94760 285 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 OR52Z1P0C646 297 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 RAD23BP54727 409 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 POLE2P56282 527 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 KRT28Q7Z3Y7 464 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 THEMISQ8N1K5 641 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 CENPTQ96BT3 561 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 MTA3Q9BTC8 594 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 PPP1R12CQ9BZL4 782 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 PCDHA6Q9UN73 950 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 G3BP2Q9UN86 482 aaKnown RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 PCDHA8Q9Y5H6 950 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 COL4A3BPQ9Y5P4 624 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 PPP1R2P41236 205 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 TUBP50607 506 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 SESN3P58005 492 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 DR1Q01658 176 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 TRAF1Q13077 416 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 LRRC55Q6ZSA7 311 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 FBF1Q8TES7 1133 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 TEKT4Q8WW24 435 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 CNKSR1Q969H4 720 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 DDX23Q9BUQ8 820 aaKnown RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 RAB17Q9H0T7 212 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 NUCKS1Q9H1E3 243 aaKnown RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 KCNMB3Q9NPA1 279 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 NKX1-2Q9UD57 310 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 DAAM1Q9Y4D1 1078 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 FLT1P17948 1338 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 ANKRD33BA6NCL7 494 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 MAP3K13O43283 966 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 GOLGA8HP0CJ92 632 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 ABCB4P21439 1286 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 CACNB1Q02641 598 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 ZNF571Q7Z3V5 609 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 FITM2Q8N6M3 262 aa8.76□□□□□ -1.01
ERCC8-204ENST00000462279 EIF1ADQ8N9N8 165 aaKnown RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 MARCH10Q8NA82 808 aaPredicted RBP8.76□□□□□ -1.01
ERCC8-204ENST00000462279 PABPC3Q9H361 631 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms