RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ZNF746Q6NUN9 644 aaPredicted RBP10.04□□□□□ -0.8
LDB1-203ENST00000461873 SWSAP1Q6NVH7 229 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 TSHZ1Q6ZSZ6 1077 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 EP400NLQ6ZTU2 488 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 RPAINQ86UA6 219 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 METTL13Q8N6R0 699 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 HLA-CQ95604 372 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 TOP1MTQ969P6 601 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 ZNF274Q96GC6 653 aaPredicted RBP10.04□□□□□ -0.8
LDB1-203ENST00000461873 FAM167AQ96KS9 214 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 SCLT1Q96NL6 688 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 TEKT3Q9BXF9 490 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 TM6SF1Q9BZW5 370 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 NRBP2Q9NSY0 501 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
LDB1-203ENST00000461873 PCDHA2Q9Y5H9 948 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 PCDHA10Q9Y5I2 948 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 MTCH2Q9Y6C9 303 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 MICAL3Q7RTP6 2002 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
LDB1-203ENST00000461873 COL1A2P08123 1366 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 A0A0C4DFX4 3053 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 CCDC194A0A1B0GVG4 234 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 DENND3A2RUS2 1198 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 LCHNA4D1U4 455 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 LINC01553A4QN01 128 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 WDR64B1ANS9 1081 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 CHRNA1P02708 482 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 KLRC1P26715 233 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 USP11P51784 963 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 ERVK-21P61565 698 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 TMEM62Q0P6H9 643 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 TRIM29Q14134 588 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 BTG3Q14201 252 aaPredicted RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 MBTPS1Q14703 1052 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 GPNMBQ14956 572 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 SPOUT1Q5T280 376 aaKnown RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 TRAF7Q6Q0C0 670 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 MTHFD1LQ6UB35 978 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 RUFY4Q6ZNE9 571 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 FAM43BQ6ZT52 329 aaPredicted RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 FAM177A1Q8N128 213 aaPredicted RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 ATP8B4Q8TF62 1192 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 GDPD5Q8WTR4 605 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 PPP2R3CQ969Q6 453 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 UIMC1Q96RL1 719 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 MAP7D2Q96T17 732 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 NAP1L4Q99733 375 aaKnown RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 CELF4Q9BZC1 486 aaKnown RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 UPF3BQ9BZI7 483 aaKnown RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 NCOA5Q9HCD5 579 aaKnown RBP10.03□□□□□ -0.8
LDB1-203ENST00000461873 PCDHA4Q9UN74 947 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 SQORQ9Y6N5 450 aa10.03□□□□□ -0.8
LDB1-203ENST00000461873 SMIM35A0A1B0GVV1 85 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 MBLAC1A4D2B0 266 aaPredicted RBP10.02□□□□□ -0.81
LDB1-203ENST00000461873 FAM86B1E9PN63 330 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 TNFRSF10AO00220 468 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 GPR182O15218 404 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 MAGEB2O15479 319 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 CHMP2AO43633 222 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 RPS6KA5O75582 802 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 FAM86B2P0C5J1 330 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 POU3F3P20264 500 aaPredicted RBP10.02□□□□□ -0.81
LDB1-203ENST00000461873 SFNP31947 248 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 CTNNB1P35222 781 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 JAK3P52333 1124 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 ADAM17P78536 824 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 ITGB3BPQ13352 177 aaPredicted RBP10.02□□□□□ -0.81
LDB1-203ENST00000461873 GPM6BQ13491 265 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 LPIN1Q14693 890 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 NONOQ15233 471 aaKnown RBP eCLIP10.02□□□□□ -0.81
LDB1-203ENST00000461873 FBXO47Q5MNV8 452 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 LRCH2Q5VUJ6 765 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 ABHD15Q6UXT9 468 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 BLIDQ8IZY5 108 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 RASGRP4Q8TDF6 673 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 UHRF1Q96T88 793 aaPredicted RBP10.02□□□□□ -0.81
LDB1-203ENST00000461873 AGXT2Q9BYV1 514 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 SUGCTQ9HAC7 445 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 PRDM6Q9NQX0 595 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 GABBR1Q9UBS5 961 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 AKT3Q9Y243 479 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 TELO2Q9Y4R8 837 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 PCDHB7Q9Y5E2 793 aa10.02□□□□□ -0.81
LDB1-203ENST00000461873 NID2Q14112 1375 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 PRUNE2Q8WUY3 3088 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 DKC1O60832 514 aaKnown RBP eCLIP10.01□□□□□ -0.81
LDB1-203ENST00000461873 ATG7O95352 703 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 ZSCAN20P17040 1043 aaPredicted RBP10.01□□□□□ -0.81
LDB1-203ENST00000461873 CD52P31358 61 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 DNM2P50570 870 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 EVCP57679 992 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 ANAPC15P60006 121 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 HTRA4P83105 476 aaPredicted RBP10.01□□□□□ -0.81
LDB1-203ENST00000461873 PKN1Q16512 942 aa10.01□□□□□ -0.81
LDB1-203ENST00000461873 EPC2Q52LR7 807 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms