RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 NPHP3-ACAD11A0A0J9YXS1 232 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 SFI1A8K8P3 1242 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 PRPF6O94906 941 aaKnown RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 PGK2P07205 417 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 CD44P16070 742 aaKnown RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 YWHABP31946 246 aaKnown RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ALDH5A1P51649 535 aaPredicted RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ERVK-9P63128 1117 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ERVK-24P63145 666 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 STRN3Q13033 797 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ADAM9Q13443 819 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 MAN2A1Q16706 1144 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 TCP11X2Q5H9J9 407 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 CYFIP1Q7L576 1253 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 VSTM4Q8IW00 320 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 SPATA20Q8TB22 786 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 LENG9Q96B70 501 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 FAM167AQ96KS9 214 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 SPAG5Q96R06 1193 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 BAG1Q99933 345 aaPredicted RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 JPH2Q9BR39 696 aaPredicted RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 TCHPQ9BT92 498 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 NUP58Q9BVL2 599 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 GBP3Q9H0R5 595 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 METTL14Q9HCE5 456 aaKnown RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ZNF302Q9NR11 478 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 TRMT1Q9NXH9 659 aaKnown RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 NRBP1Q9UHY1 535 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 VAV3Q9UKW4 847 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ODF2LQ9ULJ1 636 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 MANSC4A6NHS7 340 aaPredicted RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 KIF2AO00139 706 aaPredicted RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 HIP1RO75146 1068 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 MYCNP04198 464 aaPredicted RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 POTEJP0CG39 1038 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 BMP6P22004 513 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 KRT9P35527 623 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 CYP2J2P51589 502 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ACTR2P61160 394 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 PPP2R3AQ06190 1150 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 LRMPQ12912 555 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 NCAPHQ15003 741 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 PPP2R5AQ15172 486 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ARHGAP29Q52LW3 1261 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 TDRD12Q587J7 1177 aaKnown RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 XKR3Q5GH77 459 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 HYIQ5T013 277 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 TXLNBQ8N3L3 684 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 SCFD2Q8WU76 684 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 CEP63Q96MT8 703 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 INPP4AQ96PE3 977 aaPredicted RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 PURBQ96QR8 312 aaKnown RBP4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ACCSQ96QU6 501 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 TIPINQ9BVW5 301 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 POLD4Q9HCU8 107 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 ANKEF1Q9NU02 776 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 BTBD7Q9P203 1132 aa4.54□□□□□ -1.68
ATP13A3-206ENST00000461660 FER1L6Q2WGJ9 1857 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 GOLGA6L9A6NEM1 432 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 LRRIQ4A6NIV6 560 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 LGALS16A8MUM7 142 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 TXNP10599 105 aaKnown RBP4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 XRCC5P13010 732 aaKnown RBP4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 PEX3P56589 373 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 PSMC6P62333 389 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 PRKCEQ02156 737 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 NOLC1Q14978 699 aaKnown RBP eCLIP4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 SYCP1Q15431 976 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 SPA17Q15506 151 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 PTPN14Q15678 1187 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 KNOP1Q1ED39 458 aaKnown RBP4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 LDLRAD1Q5T700 205 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 ANKRD40Q6AI12 368 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 RINT1Q6NUQ1 792 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 KIAA1328Q86T90 577 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 SEPT1Q8WYJ6 367 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 KIFAP3Q92845 792 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 IQCDQ96DY2 449 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 CCDC51Q96ER9 411 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 MTRQ99707 1265 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 RUSC1Q9BVN2 902 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 TMEM206Q9H813 350 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 EFCC1Q9HA90 598 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 SUGCTQ9HAC7 445 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 ATP6V0A4Q9HBG4 840 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 KMT5AQ9NQR1 393 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 ARHGAP6O43182 974 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 SLITRK3O94933 977 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 ZBTB48P10074 688 aaPredicted RBP4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 MARK3P27448 753 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 MAPK4P31152 587 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 CYLC1P35663 651 aaPredicted RBP4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 STAT5BP51692 787 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 MRPS9P82933 396 aaKnown RBP4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 SREBF2Q12772 1141 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 KIF22Q14807 665 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 SPRYD7Q5W111 196 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 PLA2G4FQ68DD2 849 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 ARMCX5Q6P1M9 558 aa4.53□□□□□ -1.68
ATP13A3-206ENST00000461660 VPS36Q86VN1 386 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms