RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CTSHP09668 335 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 RSPH10BP0C881 870 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 ATP4AP20648 1035 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 PPP2R5CQ13362 524 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 CUL4AQ13619 759 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 C16orf59Q7L2K0 433 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 OTOP2Q7RTS6 562 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 NOSTRINQ8IVI9 506 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 PIAS4Q8N2W9 510 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 TRAPPC12Q8WVT3 735 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 HERVK_113Q902F9 699 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 HAS1Q92839 578 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 NRBP2Q9NSY0 501 aa11.92□□□□□ -0.5
TRAPPC12-213ENST00000461577 TRIOBPQ9H2D6 2365 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 MBLAC1A4D2B0 266 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 KIF28PB7ZC32 967 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 DKC1O60832 514 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 OATP04181 439 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 MCM7P33993 719 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 PRKCEQ02156 737 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 ZNF174Q15697 407 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 TTC38Q5R3I4 469 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 LARP1BQ659C4 914 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 NCAPH2Q6IBW4 605 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 MTHFD1LQ6UB35 978 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 B3GNT9Q6UX72 402 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 DNAJB3Q8WWF6 145 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 FAM49AQ9H0Q0 323 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 VAV3Q9UKW4 847 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 CEP131Q9UPN4 1083 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 PCDHA2Q9Y5H9 948 aa11.91□□□□□ -0.5
TRAPPC12-213ENST00000461577 M0QZ92 97 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 EML1O00423 815 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 SOX1O00570 391 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 WNT7AO00755 349 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 ZNF862O60290 1169 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 NBNO60934 754 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 U2AF2P26368 475 aaKnown RBP eCLIP11.9□□□□□ -0.54e-7■■□□□ 12.2
TRAPPC12-213ENST00000461577 KLRC1P26715 233 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 TXKP42681 527 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 ORC2Q13416 577 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 EPHA7Q15375 998 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 UGCGQ16739 394 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 CNKSR3Q6P9H4 555 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 RPAINQ86UA6 219 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 HSCBQ8IWL3 235 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 BANK1Q8NDB2 785 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 EVPLQ92817 2033 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 ZBTB10Q96DT7 871 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 TTC12Q9H892 705 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 PCDHA12Q9UN75 941 aa11.9□□□□□ -0.5
TRAPPC12-213ENST00000461577 TET1Q8NFU7 2136 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 SMIM35A0A1B0GVV1 85 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 MAGEB2O15479 319 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 CXCL10P02778 98 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 P4HBP07237 508 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 QARSP47897 775 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 PSMC5P62195 406 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 FAM26DQ5JW98 314 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 IER5Q5VY09 327 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 TRAF7Q6Q0C0 670 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 NME8Q8N427 588 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 SNX21Q969T3 373 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 VWCEQ96DN2 955 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 MTMR9Q96QG7 549 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 CDY2AQ9Y6F7 541 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 SLC4A7Q9Y6M7 1214 aa11.89□□□□□ -0.51
TRAPPC12-213ENST00000461577 VPS37CA5D8V6 355 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 BAIAP3O94812 1187 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 OR52Z1P0C646 297 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 PDCP20941 246 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 KCNJ6P48051 423 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 MRPS6P82932 125 aaKnown RBP11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 SMAD3P84022 425 aaKnown RBP11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 MGAT3Q09327 533 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 MBTPS1Q14703 1052 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 GPNMBQ14956 572 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 MTERF2Q49AM1 385 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 XKR3Q5GH77 459 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 METTL13Q8N6R0 699 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 SEPT8Q92599 483 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 INTS4Q96HW7 963 aaKnown RBP11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 DYDC2Q96IM9 177 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 CXXC1Q9P0U4 656 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 TRPV2Q9Y5S1 764 aa11.88□□□□□ -0.51
TRAPPC12-213ENST00000461577 ZBTB42B2RXF5 422 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms