RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 TUFT1Q9NNX1 390 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 GTF2IRD1Q9UHL9 959 aa12.65□□□□□ -0.38
SSBP1-202ENST00000461433 POTEB3A0JP26 581 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 ZBTB39O15060 712 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 LYPLA2O95372 231 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 INSRRP14616 1297 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 LONP1P36776 959 aaKnown RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 PRKCEQ02156 737 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 SPECC1Q5M775 1068 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 GDF6Q6KF10 455 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 POTEBQ6S5H4 581 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 USP49Q70CQ1 688 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 ANO5Q75V66 913 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 TPH2Q8IWU9 490 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 C4orf19Q8IY42 314 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 KRI1Q8N9T8 703 aaKnown RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 NEK9Q8TD19 979 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 ATP8B4Q8TF62 1192 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 ATP6V0A1Q93050 837 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 AK8Q96MA6 479 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 PCDHA7Q9UN72 937 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 ARID2Q68CP9 1835 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 TMEM150BA6NC51 233 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 HBP1O60381 514 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 CD4P01730 458 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 OATP04181 439 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 RGS19P49795 217 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 ZNF200P98182 395 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 PTPN11Q06124 597 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 MARCH8Q5T0T0 291 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 TRMT1LQ7Z2T5 733 aaKnown RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 FAM126BQ8IXS8 530 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 KCNG4Q8TDN1 519 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 EPSTI1Q96J88 318 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 NIFKQ9BYG3 293 aaKnown RBP12.64□□□□□ -0.39
SSBP1-202ENST00000461433 SEZ6LQ9BYH1 1024 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 SETD4Q9NVD3 440 aa12.64□□□□□ -0.39
SSBP1-202ENST00000461433 A0A087WWV3 80 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 B4GALT4O60513 344 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 CCT6AP40227 531 aaKnown RBP12.63□□□□□ -0.39
SSBP1-202ENST00000461433 RTP1P59025 263 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 TARBP2Q15633 366 aaKnown RBP12.63□□□□□ -0.39
SSBP1-202ENST00000461433 GRIK4Q16099 956 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 XKR3Q5GH77 459 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 HYIQ5T013 277 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 CKAP2LQ8IYA6 745 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 ZNF579Q8NAF0 562 aaKnown RBP12.63□□□□□ -0.39
SSBP1-202ENST00000461433 ERMNQ8TAM6 284 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 SNX29Q8TEQ0 813 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 TRAPPC12Q8WVT3 735 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 PNMA5Q96PV4 448 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 SCAND2PQ9GZW5 306 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-202ENST00000461433 TRPV6Q9H1D0 765 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 TRMT13Q9NUP7 481 aaKnown RBP12.63□□□□□ -0.39
SSBP1-202ENST00000461433 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 NRCAMQ92823 1304 aa12.63□□□□□ -0.39
SSBP1-202ENST00000461433 CUTAO60888 179 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 MUTP22033 750 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 YWHABP31946 246 aaKnown RBP12.62□□□□□ -0.39
SSBP1-202ENST00000461433 TLE2Q04725 743 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 FAAP100Q0VG06 881 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 GRB10Q13322 594 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 KRT79Q5XKE5 535 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 HAUS3Q68CZ6 603 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 SYMPKQ92797 1274 aaKnown RBP12.62□□□□□ -0.39
SSBP1-202ENST00000461433 ZBTB10Q96DT7 871 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 FAM167AQ96KS9 214 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 TOX2Q96NM4 488 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 SH2D3AQ9BRG2 576 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 NRBP2Q9NSY0 501 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 STK24Q9Y6E0 443 aa12.62□□□□□ -0.39
SSBP1-202ENST00000461433 EVPLQ92817 2033 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 COL1A2P08123 1366 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 C17orf102A2RUQ5 167 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 MBLAC1A4D2B0 266 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-202ENST00000461433 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 TREHO43280 583 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 PQBP1O60828 265 aaKnown RBP12.61□□□□□ -0.39
SSBP1-202ENST00000461433 DKC1O60832 514 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSBP1-202ENST00000461433 ME1P48163 572 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 NPEPPSP55786 919 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms