RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 SLC37A4O43826 429 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 EDIL3O43854 480 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 NBNO60934 754 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 ATP2A2P16615 1042 aaKnown RBP23.11■■□□□ 1.29
SCAF8-204ENST00000461219 ADAM17P78536 824 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 IKBKEQ14164 716 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 RAB30Q15771 203 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 ZNF484Q5JVG2 852 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 RASIP1Q5U651 963 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 RUFY4Q6ZNE9 571 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 TRAPPC12Q8WVT3 735 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 DNAJB3Q8WWF6 145 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 BBXQ8WY36 941 aaPredicted RBP23.11■■□□□ 1.29
SCAF8-204ENST00000461219 FAM20AQ96MK3 541 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 CEP131Q9UPN4 1083 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 COL1A2P08123 1366 aa23.11■■□□□ 1.29
SCAF8-204ENST00000461219 GRXCR1A8MXD5 290 aa23.1■■□□□ 1.29
SCAF8-204ENST00000461219 DNAJB2P25686 324 aa23.1■■□□□ 1.29
SCAF8-204ENST00000461219 RDM1Q8NG50 284 aa23.1■■□□□ 1.29
SCAF8-204ENST00000461219 MBOAT7Q96N66 472 aa23.1■■□□□ 1.29
SCAF8-204ENST00000461219 SLC9A7Q96T83 725 aa23.1■■□□□ 1.29
SCAF8-204ENST00000461219 BACH2Q9BYV9 841 aa23.1■■□□□ 1.29
SCAF8-204ENST00000461219 NRBP2Q9NSY0 501 aa23.1■■□□□ 1.29
SCAF8-204ENST00000461219 MBLAC1A4D2B0 266 aaPredicted RBP23.09■■□□□ 1.29
SCAF8-204ENST00000461219 FAM205CA6NFA0 338 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 EFCAB14O75071 495 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 PSMD10O75832 226 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 CXCL10P02778 98 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 ATP2B1P20020 1258 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 EARS2Q5JPH6 523 aaKnown RBP23.09■■□□□ 1.29
SCAF8-204ENST00000461219 IER5Q5VY09 327 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 FAM109BQ6ICB4 259 aaPredicted RBP23.09■■□□□ 1.29
SCAF8-204ENST00000461219 ETNPPLQ8TBG4 499 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 SEPT8Q92599 483 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 TIFAQ96CG3 184 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 PCDHA2Q9Y5H9 948 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 MAFBQ9Y5Q3 323 aaPredicted RBP23.09■■□□□ 1.29
SCAF8-204ENST00000461219 SIP14410 1827 aa23.09■■□□□ 1.29
SCAF8-204ENST00000461219 KIF28PB7ZC32 967 aa23.08■■□□□ 1.29
SCAF8-204ENST00000461219 KLRC1P26715 233 aa23.08■■□□□ 1.29
SCAF8-204ENST00000461219 MARCH8Q5T0T0 291 aa23.08■■□□□ 1.29
SCAF8-204ENST00000461219 MTHFD1LQ6UB35 978 aa23.08■■□□□ 1.29
SCAF8-204ENST00000461219 POTEDQ86YR6 584 aa23.08■■□□□ 1.29
SCAF8-204ENST00000461219 SLFN12Q8IYM2 578 aa23.08■■□□□ 1.29
SCAF8-204ENST00000461219 TMX3Q96JJ7 454 aa23.08■■□□□ 1.29
SCAF8-204ENST00000461219 ZBED2Q9BTP6 218 aa23.08■■□□□ 1.29
SCAF8-204ENST00000461219 LAMA2P24043 3122 aaKnown RBP23.08■■□□□ 1.28
SCAF8-204ENST00000461219 IGSF9BQ9UPX0 1349 aa23.08■■□□□ 1.28
SCAF8-204ENST00000461219 ABHD14A-ACY1A0A1B0GW23 586 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 TBX3O15119 743 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 OATP04181 439 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 MRPS6P82932 125 aaKnown RBP23.07■■□□□ 1.28
SCAF8-204ENST00000461219 PRKCEQ02156 737 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 CALCRLQ16602 461 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 METTL13Q8N6R0 699 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 TNFRSF25Q93038 417 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 ZBTB10Q96DT7 871 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 PBX4Q9BYU1 374 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 PTPRSQ13332 1948 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 MYO9BQ13459 2157 aa23.07■■□□□ 1.28
SCAF8-204ENST00000461219 NEMFO60524 1076 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 TMEM62Q0P6H9 643 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 MBTPS1Q14703 1052 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 TRAF7Q6Q0C0 670 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 RPAINQ86UA6 219 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 DBF4BQ8NFT6 615 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 FBXO18Q8NFZ0 1043 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 VWCEQ96DN2 955 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 FOXP1Q9H334 677 aaPredicted RBP23.06■■□□□ 1.28
SCAF8-204ENST00000461219 SEPT9Q9UHD8 586 aaPredicted RBP23.06■■□□□ 1.28
SCAF8-204ENST00000461219 NOL7Q9UMY1 257 aaKnown RBP23.06■■□□□ 1.28
SCAF8-204ENST00000461219 CDY2AQ9Y6F7 541 aa23.06■■□□□ 1.28
SCAF8-204ENST00000461219 TMEM265A0A087WTH1 108 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 SMIM35A0A1B0GVV1 85 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 DKC1O60832 514 aaKnown RBP eCLIP23.05■■□□□ 1.28
SCAF8-204ENST00000461219 PBX2P40425 430 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 RABGGTBP53611 331 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 WDR5P61964 334 aaKnown RBP23.05■■□□□ 1.28
SCAF8-204ENST00000461219 FAM26DQ5JW98 314 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 NCAPH2Q6IBW4 605 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 NME8Q8N427 588 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 PHOSPHO2Q8TCD6 241 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 APBB2Q92870 758 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 IFIH1Q9BYX4 1025 aaKnown RBP23.05■■□□□ 1.28
SCAF8-204ENST00000461219 SLC28A3Q9HAS3 691 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 KCNMB3Q9NPA1 279 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 SMC3Q9UQE7 1217 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 GINS2Q9Y248 185 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.05■■□□□ 1.28
SCAF8-204ENST00000461219 TRPV2Q9Y5S1 764 aa23.05■■□□□ 1.28
SCAF8-204ENST00000461219 H3BQV1 296 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 CHRNA1P02708 482 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 AMHP03971 560 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 GHRP10912 638 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 ATP4AP20648 1035 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 TMOD1P28289 359 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 PPP2R5CQ13362 524 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 GPNMBQ14956 572 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 PLEKHG4Q58EX7 1191 aa23.04■■□□□ 1.28
SCAF8-204ENST00000461219 MCTP1Q6DN14 999 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms