RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 GNAT1P11488 350 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 BPIP17213 487 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 CNGA1P29973 690 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 CDKN1CP49918 316 aaPredicted RBP4.8□□□□□ -1.64
RFC4-211ENST00000460408 DNM2P50570 870 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 JAM2P57087 298 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 ST5P78524 1137 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 SPIRE1Q08AE8 756 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 CDSNQ15517 529 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 GPR19Q15760 415 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 BORAQ6PGQ7 559 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 CRIP3Q6Q6R5 217 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 DDX46Q7L014 1031 aaKnown RBP4.8□□□□□ -1.64
RFC4-211ENST00000460408 SPRED1Q7Z699 444 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 ANKRD13AQ8IZ07 590 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 CISD2Q8N5K1 135 aaKnown RBP4.8□□□□□ -1.64
RFC4-211ENST00000460408 KYQ8NBH2 561 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 UHMK1Q8TAS1 419 aaKnown RBP4.8□□□□□ -1.64
RFC4-211ENST00000460408 PIP4K2CQ8TBX8 421 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 USP33Q8TEY7 942 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 PDGFDQ9GZP0 370 aaPredicted RBP4.8□□□□□ -1.64
RFC4-211ENST00000460408 ST6GALNAC2Q9UJ37 374 aa4.8□□□□□ -1.64
RFC4-211ENST00000460408 MAN2B1O00754 1011 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 SGSM2O43147 1006 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 ZBTB48P10074 688 aaPredicted RBP4.79□□□□□ -1.64
RFC4-211ENST00000460408 COL6A2P12110 1019 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 IBSPP21815 317 aaPredicted RBP4.79□□□□□ -1.64
RFC4-211ENST00000460408 KRTAP1-1Q07627 177 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 CRY1Q16526 586 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 CT47A1Q5JQC4 288 aaPredicted RBP4.79□□□□□ -1.64
RFC4-211ENST00000460408 STEAP3Q658P3 488 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 FSTL4Q6MZW2 842 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 CYP4F22Q6NT55 531 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 GLB1LQ6UWU2 654 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 ARHGAP36Q6ZRI8 547 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 FAM124AQ86V42 546 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 OSTM1Q86WC4 334 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 DDX42Q86XP3 938 aaKnown RBP eCLIP4.79□□□□□ -1.64
RFC4-211ENST00000460408 DCP2Q8IU60 420 aaKnown RBP4.79□□□□□ -1.64
RFC4-211ENST00000460408 NOSTRINQ8IVI9 506 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 NXPE1Q8N323 547 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 PRPF38AQ8NAV1 312 aaKnown RBP4.79□□□□□ -1.64
RFC4-211ENST00000460408 SH3RF3Q8TEJ3 882 aaPredicted RBP4.79□□□□□ -1.64
RFC4-211ENST00000460408 MENTQ9BUN1 341 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 MRIQ9BWK5 157 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 CATSPERZQ9NTU4 200 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 SRPK3Q9UPE1 567 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 ZNF652Q9Y2D9 606 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 SIT1Q9Y3P8 196 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 TELO2Q9Y4R8 837 aa4.79□□□□□ -1.64
RFC4-211ENST00000460408 ZNF536O15090 1300 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 KRIT1O00522 736 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 CDK11BP21127 795 aaKnown RBP4.78□□□□□ -1.64
RFC4-211ENST00000460408 ADCYAP1R1P41586 468 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 EPHA5P54756 1037 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 IGBP1P78318 339 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 STRN3Q13033 797 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 CHRNA2Q15822 529 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 PRR31Q5SQ13 230 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 LIMS2Q7Z4I7 341 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 PTRH1Q86Y79 214 aaKnown RBP4.78□□□□□ -1.64
RFC4-211ENST00000460408 TTLL6Q8N841 843 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 TXNDC5Q8NBS9 432 aaKnown RBP4.78□□□□□ -1.64
RFC4-211ENST00000460408 SMC1BQ8NDV3 1235 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 STAG1Q8WVM7 1258 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 SEC14L1Q92503 715 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 CABP5Q9NP86 173 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 DSEQ9UL01 958 aa4.78□□□□□ -1.64
RFC4-211ENST00000460408 PTPDC1A2A3K4 754 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 NEMP1O14524 444 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 HGSO14964 777 aaPredicted RBP4.77□□□□□ -1.65
RFC4-211ENST00000460408 PPM1GO15355 546 aaPredicted RBP4.77□□□□□ -1.65
RFC4-211ENST00000460408 ATP2A2P16615 1042 aaKnown RBP4.77□□□□□ -1.65
RFC4-211ENST00000460408 SCNN1BP51168 640 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 ANAPC15P60006 121 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 SURF1Q15526 300 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 FIGNQ5HY92 759 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 MCTP2Q6DN12 878 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 ETV3LQ6ZN32 361 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 LHFPL2Q6ZUX7 228 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 KCTD1Q719H9 257 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 MIB1Q86YT6 1006 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 C2orf69Q8N8R5 385 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 OR2W6PQ8NHA6 318 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 SYT3Q9BQG1 590 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 BOCQ9BWV1 1114 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 AP5M1Q9H0R1 490 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 SMOC1Q9H4F8 434 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 SLITRK6Q9H5Y7 841 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 IFT22Q9H7X7 185 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.77□□□□□ -1.65
RFC4-211ENST00000460408 MYOTQ9UBF9 498 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 MCM8Q9UJA3 840 aa4.77□□□□□ -1.65
RFC4-211ENST00000460408 TCRBV5S2A0A599 114 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 SLC12A8A0AV02 714 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 C9orf118A6NHY6 69 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 DVL2O14641 736 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 KCNK3O14649 394 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 SLC27A2O14975 620 aa4.76□□□□□ -1.65
RFC4-211ENST00000460408 GPR39O43194 453 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms