RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 ARHGAP28Q9P2N2 729 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 ASB1Q9Y576 335 aa7.3□□□□□ -1.24
CCDC50-203ENST00000460064 OAS3Q9Y6K5 1087 aaKnown RBP7.3□□□□□ -1.24
CCDC50-203ENST00000460064 SNUPNO95149 360 aaKnown RBP7.29□□□□□ -1.24
CCDC50-203ENST00000460064 STAT5AP42229 794 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 LRRC41Q15345 812 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 PCBP2Q15366 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
CCDC50-203ENST00000460064 CCDC181Q5TID7 509 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 OLFML2BQ68BL8 750 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 TIGD7Q6NT04 549 aaPredicted RBP7.29□□□□□ -1.24
CCDC50-203ENST00000460064 CD300LDQ6UXZ3 194 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 CBLL1Q75N03 491 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 TMC6Q7Z403 805 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 PNMA8AQ86V59 439 aaPredicted RBP7.29□□□□□ -1.24
CCDC50-203ENST00000460064 ZSWIM9Q86XI8 627 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 MIB1Q86YT6 1006 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 IRF2BP1Q8IU81 584 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 PHYKPLQ8IUZ5 450 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 WDR75Q8IWA0 830 aaKnown RBP7.29□□□□□ -1.24
CCDC50-203ENST00000460064 FAM126BQ8IXS8 530 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 AMOTL1Q8IY63 956 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 CHPFQ8IZ52 775 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 C1orf162Q8NEQ5 155 aaPredicted RBP7.29□□□□□ -1.24
CCDC50-203ENST00000460064 E2F7Q96AV8 911 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 ANO3Q9BYT9 981 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 UCKL1Q9NWZ5 548 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 USP36Q9P275 1121 aaKnown RBP7.29□□□□□ -1.24
CCDC50-203ENST00000460064 IP6K2Q9UHH9 426 aa7.29□□□□□ -1.24
CCDC50-203ENST00000460064 LUC7L2Q9Y383 392 aaKnown RBP7.29□□□□□ -1.24
CCDC50-203ENST00000460064 UBA6A0AVT1 1052 aaPredicted RBP7.28□□□□□ -1.24
CCDC50-203ENST00000460064 TSPAN6O43657 245 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 ENO2P09104 434 aaPredicted RBP7.28□□□□□ -1.24
CCDC50-203ENST00000460064 GPR3P46089 330 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 NKX3-2P78367 333 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 ZNF200P98182 395 aaPredicted RBP7.28□□□□□ -1.24
CCDC50-203ENST00000460064 PIN1Q13526 163 aaPredicted RBP7.28□□□□□ -1.24
CCDC50-203ENST00000460064 CLUL1Q15846 466 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 TTC38Q5R3I4 469 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 CD276Q5ZPR3 534 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 TEPPQ6URK8 271 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 MPZL3Q6UWV2 235 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 CILP2Q8IUL8 1156 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 C7orf31Q8N865 590 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 TGFBRAP1Q8WUH2 860 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 FOXRED1Q96CU9 486 aaPredicted RBP7.28□□□□□ -1.24
CCDC50-203ENST00000460064 ACAP3Q96P50 834 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 SLC13A1Q9BZW2 595 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 SEMA4AQ9H3S1 761 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 ZNF552Q9H707 407 aaPredicted RBP7.28□□□□□ -1.24
CCDC50-203ENST00000460064 ZNF180Q9UJW8 692 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 MRFAP1Q9Y605 127 aa7.28□□□□□ -1.24
CCDC50-203ENST00000460064 H2AFYO75367 372 aaKnown RBP7.27□□□□□ -1.25
CCDC50-203ENST00000460064 APOL3O95236 402 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 RBP3P10745 1247 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 ZSCAN20P17040 1043 aaPredicted RBP7.27□□□□□ -1.25
CCDC50-203ENST00000460064 AOAHP28039 575 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 VIPR1P32241 457 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 SRSF3P84103 164 aaKnown RBP7.27□□□□□ -1.25
CCDC50-203ENST00000460064 CT83Q5H943 113 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 TTLL7Q6ZT98 887 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 ESPNLQ6ZVH7 1005 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 ZNF605Q86T29 641 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 RTN4RL1Q86UN2 441 aaPredicted RBP7.27□□□□□ -1.25
CCDC50-203ENST00000460064 ZC3H18Q86VM9 953 aaKnown RBP7.27□□□□□ -1.25
CCDC50-203ENST00000460064 POFUT1Q9H488 388 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 SLC39A2Q9NP94 309 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 NGRNQ9NPE2 291 aaKnown RBP7.27□□□□□ -1.25
CCDC50-203ENST00000460064 LUC7LQ9NQ29 371 aaKnown RBP7.27□□□□□ -1.25
CCDC50-203ENST00000460064 HSPBP1Q9NZL4 362 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 BTBD7Q9P203 1132 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 FAN1Q9Y2M0 1017 aa7.27□□□□□ -1.25
CCDC50-203ENST00000460064 SCGB1D2O95969 90 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 ASGR2P07307 311 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 CT47B1P0C2W7 299 aaPredicted RBP7.26□□□□□ -1.25
CCDC50-203ENST00000460064 CLEC2LP0C7M8 214 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 NCAM1P13591 858 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 PTGS1P23219 599 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 PFKPQ01813 784 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 SLC6A3Q01959 620 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 CR1LQ2VPA4 569 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 FAM26EQ8N5C1 309 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 MAML3Q96JK9 1138 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 CDH19Q9H159 772 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 SIRT5Q9NXA8 310 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
CCDC50-203ENST00000460064 KLHL33A6NCF5 533 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 TRIM75PA6NK02 468 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 FZD9O00144 591 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 NFIBO00712 420 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 XPOTO43592 962 aaKnown RBP7.25□□□□□ -1.25
CCDC50-203ENST00000460064 PRPF6O94906 941 aaKnown RBP7.25□□□□□ -1.25
CCDC50-203ENST00000460064 MC4RP32245 332 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 RECQLP46063 649 aaPredicted RBP7.25□□□□□ -1.25
CCDC50-203ENST00000460064 ACAP2Q15057 778 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 UGT8Q16880 541 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 PRAMEF9Q5VWM5 478 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 VASNQ6EMK4 673 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 TMEM132EQ6IEE7 984 aa7.25□□□□□ -1.25
CCDC50-203ENST00000460064 CXorf67Q86X51 503 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms