RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GAS2L1Q99501 681 aaPredicted RBP17.66■□□□□ 0.42
SDF4-204ENST00000459994 ZDHHC9Q9Y397 364 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 RSPH10B2B2RC85 870 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 LGR5O75473 907 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 RSPH10BP0C881 870 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 IGFBP4P22692 258 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 SREBF1P36956 1147 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 FAM117BQ6P1L5 589 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 RASGRP4Q8TDF6 673 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 SEPT1Q8WYJ6 367 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 ZSCAN16Q9H4T2 348 aaPredicted RBP17.65■□□□□ 0.42
SDF4-204ENST00000459994 TCF20Q9UGU0 1960 aaKnown RBP17.65■□□□□ 0.42
SDF4-204ENST00000459994 SPTBN5Q9NRC6 3674 aaKnown RBP17.65■□□□□ 0.42
SDF4-204ENST00000459994 KIAA1671Q9BY89 1806 aa17.65■□□□□ 0.42
SDF4-204ENST00000459994 FAM86B1E9PN63 330 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 EDIL3O43854 480 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 F13A1P00488 732 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 FAM86B2P0C5J1 330 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 KCNJ6P48051 423 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 RESTQ13127 1097 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 NR5A1Q13285 461 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 MARCH8Q5T0T0 291 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 KRT25Q7Z3Z0 450 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 BRAPQ7Z569 592 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 GIMAP8Q8ND71 665 aaPredicted RBP17.64■□□□□ 0.41
SDF4-204ENST00000459994 CRYGNQ8WXF5 182 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 CDHR1Q96JP9 859 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 AGO4Q9HCK5 861 aaKnown RBP17.64■□□□□ 0.41
SDF4-204ENST00000459994 SLC9A2Q9UBY0 812 aa17.64■□□□□ 0.41
SDF4-204ENST00000459994 ZNF215Q9UL58 517 aaPredicted RBP17.64■□□□□ 0.41
SDF4-204ENST00000459994 IGLV3-22A0A075B6J6 115 aa17.63■□□□□ 0.41
SDF4-204ENST00000459994 KIF28PB7ZC32 967 aa17.63■□□□□ 0.41
SDF4-204ENST00000459994 DDX39AO00148 427 aaKnown RBP17.63■□□□□ 0.41
SDF4-204ENST00000459994 TLL1O43897 1013 aa17.63■□□□□ 0.41
SDF4-204ENST00000459994 GNL2Q13823 731 aaKnown RBP17.63■□□□□ 0.41
SDF4-204ENST00000459994 CEP55Q53EZ4 464 aa17.63■□□□□ 0.41
SDF4-204ENST00000459994 PLEKHG4Q58EX7 1191 aa17.63■□□□□ 0.41
SDF4-204ENST00000459994 NOSTRINQ8IVI9 506 aa17.63■□□□□ 0.41
SDF4-204ENST00000459994 TRAPPC12Q8WVT3 735 aa17.63■□□□□ 0.41
SDF4-204ENST00000459994 EHMT1Q9H9B1 1298 aa17.63■□□□□ 0.41
SDF4-204ENST00000459994 JPH1Q9HDC5 661 aaPredicted RBP17.63■□□□□ 0.41
SDF4-204ENST00000459994 CCDC194A0A1B0GVG4 234 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 ABHD14A-ACY1A0A1B0GW23 586 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 MEIS1O00470 390 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 PARNO95453 639 aaKnown RBP17.62■□□□□ 0.41
SDF4-204ENST00000459994 CCNE2O96020 404 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 CHRNA1P02708 482 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 ACTR2P61160 394 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 IGBP1P78318 339 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 PPFIA1Q13136 1202 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 IKBKEQ14164 716 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 GRIK4Q16099 956 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 FERMT3Q86UX7 667 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 ARNTL2Q8WYA1 636 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 GLG1Q92896 1179 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 NFASCO94856 1347 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 EMSYQ7Z589 1322 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 RALGAPA2Q2PPJ7 1873 aa17.62■□□□□ 0.41
SDF4-204ENST00000459994 COL4A6Q14031 1691 aa17.61■□□□□ 0.41
SDF4-204ENST00000459994 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.61■□□□□ 0.41
SDF4-204ENST00000459994 MAFGO15525 162 aa17.61■□□□□ 0.41
SDF4-204ENST00000459994 DHX15O43143 795 aaKnown RBP17.61■□□□□ 0.41
SDF4-204ENST00000459994 GJB5O95377 273 aa17.61■□□□□ 0.41
SDF4-204ENST00000459994 MGAT3Q09327 533 aa17.61■□□□□ 0.41
SDF4-204ENST00000459994 NONOQ15233 471 aaKnown RBP eCLIP17.61■□□□□ 0.41
SDF4-204ENST00000459994 FAM26DQ5JW98 314 aa17.61■□□□□ 0.41
SDF4-204ENST00000459994 MICALL1Q8N3F8 863 aa17.61■□□□□ 0.41
SDF4-204ENST00000459994 ERAP1Q9NZ08 941 aa17.61■□□□□ 0.41
SDF4-204ENST00000459994 NRCAMQ92823 1304 aa17.61■□□□□ 0.41
SDF4-204ENST00000459994 MBLAC1A4D2B0 266 aaPredicted RBP17.6■□□□□ 0.41
SDF4-204ENST00000459994 LPXNO60711 386 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 ATG7O95352 703 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 GNAT1P11488 350 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 INSRRP14616 1297 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 TRAPPC10P48553 1259 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 PLCB4Q15147 1175 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 EARS2Q5JPH6 523 aaKnown RBP17.6■□□□□ 0.41
SDF4-204ENST00000459994 FOXD4L5Q5VV16 416 aaPredicted RBP17.6■□□□□ 0.41
SDF4-204ENST00000459994 PIK3AP1Q6ZUJ8 805 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 DNAJB3Q8WWF6 145 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 FOXD4L4Q8WXT5 416 aaPredicted RBP17.6■□□□□ 0.41
SDF4-204ENST00000459994 SMARCAD1Q9H4L7 1026 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 TUBE1Q9UJT0 475 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 ATP6V1DQ9Y5K8 247 aa17.6■□□□□ 0.41
SDF4-204ENST00000459994 LINC01553A4QN01 128 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 CYP3A4P08684 503 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 ZNF76P36508 570 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 MYOCDQ8IZQ8 938 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 GDPD5Q8WTR4 605 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 SDF4Q9BRK5 362 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 ZBED2Q9BTP6 218 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 MTUS1Q9ULD2 1270 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 MTCH2Q9Y6C9 303 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 TTC3P53804 2025 aa17.59■□□□□ 0.41
SDF4-204ENST00000459994 IGKV6D-21A0A0A0MT36 114 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 FAM205CA6NFA0 338 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 CAND2O75155 1236 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 GHRP10912 638 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 304.1 ms