RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 MOXD1Q6UVY6 613 aa20.99■□□□□ 0.95
HOXD3-204ENST00000459979 ABHD15Q6UXT9 468 aa20.99■□□□□ 0.95
HOXD3-204ENST00000459979 KRT25Q7Z3Z0 450 aa20.99■□□□□ 0.95
HOXD3-204ENST00000459979 GLG1Q92896 1179 aa20.99■□□□□ 0.95
HOXD3-204ENST00000459979 ZNF577Q9BSK1 485 aa20.99■□□□□ 0.95
HOXD3-204ENST00000459979 SETD4Q9NVD3 440 aa20.99■□□□□ 0.95
HOXD3-204ENST00000459979 KCNJ14Q9UNX9 436 aa20.99■□□□□ 0.95
HOXD3-204ENST00000459979 XIRP2A4UGR9 3374 aa20.99■□□□□ 0.95
HOXD3-204ENST00000459979 TREHO43280 583 aa20.98■□□□□ 0.95
HOXD3-204ENST00000459979 CAND2O75155 1236 aa20.98■□□□□ 0.95
HOXD3-204ENST00000459979 SLC26A2P50443 739 aa20.98■□□□□ 0.95
HOXD3-204ENST00000459979 ST3GAL1Q11201 340 aa20.98■□□□□ 0.95
HOXD3-204ENST00000459979 LMBR1Q8WVP7 490 aa20.98■□□□□ 0.95
HOXD3-204ENST00000459979 MBOAT7Q96N66 472 aa20.98■□□□□ 0.95
HOXD3-204ENST00000459979 AZI2Q9H6S1 392 aa20.98■□□□□ 0.95
HOXD3-204ENST00000459979 BRWD1Q9NSI6 2320 aa20.97■□□□□ 0.95
HOXD3-204ENST00000459979 STAT5BP51692 787 aa20.97■□□□□ 0.95
HOXD3-204ENST00000459979 NONOQ15233 471 aaKnown RBP eCLIP20.97■□□□□ 0.95
HOXD3-204ENST00000459979 Q4G0T1 1027 aa20.97■□□□□ 0.95
HOXD3-204ENST00000459979 ZNF746Q6NUN9 644 aaPredicted RBP20.97■□□□□ 0.95
HOXD3-204ENST00000459979 RPAINQ86UA6 219 aa20.97■□□□□ 0.95
HOXD3-204ENST00000459979 TNPO1Q92973 898 aaKnown RBP20.97■□□□□ 0.95
HOXD3-204ENST00000459979 ZSCAN31Q96LW9 406 aaPredicted RBP20.97■□□□□ 0.95
HOXD3-204ENST00000459979 ABHD14A-ACY1A0A1B0GW23 586 aa20.96■□□□□ 0.95
HOXD3-204ENST00000459979 MSH4O15457 936 aa20.96■□□□□ 0.95
HOXD3-204ENST00000459979 GJB5O95377 273 aa20.96■□□□□ 0.95
HOXD3-204ENST00000459979 KRT76Q01546 638 aa20.96■□□□□ 0.95
HOXD3-204ENST00000459979 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.96■□□□□ 0.95
HOXD3-204ENST00000459979 SMAP1Q8IYB5 467 aaPredicted RBP20.96■□□□□ 0.95
HOXD3-204ENST00000459979 HLA-CQ95604 372 aa20.96■□□□□ 0.95
HOXD3-204ENST00000459979 RIT2Q99578 217 aa20.96■□□□□ 0.95
HOXD3-204ENST00000459979 LLPHQ9BRT6 129 aaKnown RBP20.96■□□□□ 0.95
HOXD3-204ENST00000459979 GJB4Q9NTQ9 266 aa20.96■□□□□ 0.95
HOXD3-204ENST00000459979 COG5Q9UP83 839 aa20.96■□□□□ 0.95
HOXD3-204ENST00000459979 MYH9P35579 1960 aaKnown RBP20.96■□□□□ 0.95
HOXD3-204ENST00000459979 MBLAC1A4D2B0 266 aaPredicted RBP20.95■□□□□ 0.94
HOXD3-204ENST00000459979 LINC01553A4QN01 128 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 RRN3P2A6NIE6 340 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 PPFIA1Q13136 1202 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 IKBKEQ14164 716 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 RABEP1Q15276 862 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 TAF2Q6P1X5 1199 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 SLC5A5Q92911 643 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 RAD9AQ99638 391 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 SUGCTQ9HAC7 445 aa20.95■□□□□ 0.94
HOXD3-204ENST00000459979 UPF2Q9HAU5 1272 aaKnown RBP20.95■□□□□ 0.94
HOXD3-204ENST00000459979 SH2B1Q9NRF2 756 aaPredicted RBP20.95■□□□□ 0.94
HOXD3-204ENST00000459979 WDR81Q562E7 1941 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 CCDC194A0A1B0GVG4 234 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 DDX39AO00148 427 aaKnown RBP20.94■□□□□ 0.94
HOXD3-204ENST00000459979 JAK2O60674 1132 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 DTNBO60941 627 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 MARK3P27448 753 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 THPOP40225 353 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 PLCB4Q15147 1175 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 GRIK4Q16099 956 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 MARCH8Q5T0T0 291 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 FAM160B1Q5W0V3 765 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 MIS18BP1Q6P0N0 1132 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 OXER1Q8TDS5 423 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 PCDHA10Q9Y5I2 948 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 NLRC5Q86WI3 1866 aa20.94■□□□□ 0.94
HOXD3-204ENST00000459979 RSPH10B2B2RC85 870 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 RPLP2P05387 115 aaKnown RBP20.93■□□□□ 0.94
HOXD3-204ENST00000459979 RSPH10BP0C881 870 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 INSRRP14616 1297 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 ERVK-21P61565 698 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 INF2Q27J81 1249 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 FAM26DQ5JW98 314 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 PPP4R3AQ6IN85 833 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 CCDC60Q8IWA6 550 aaPredicted RBP20.93■□□□□ 0.94
HOXD3-204ENST00000459979 DBF4BQ8NFT6 615 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 TNFRSF25Q93038 417 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 TGS1Q96RS0 853 aaKnown RBP20.93■□□□□ 0.94
HOXD3-204ENST00000459979 OSBPL7Q9BZF2 842 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 EPHX3Q9H6B9 360 aa20.93■□□□□ 0.94
HOXD3-204ENST00000459979 MAFBQ9Y5Q3 323 aaPredicted RBP20.93■□□□□ 0.94
HOXD3-204ENST00000459979 PSMD10O75832 226 aa20.92■□□□□ 0.94
HOXD3-204ENST00000459979 TDP2O95551 362 aa20.92■□□□□ 0.94
HOXD3-204ENST00000459979 GCFC2P16383 781 aaKnown RBP20.92■□□□□ 0.94
HOXD3-204ENST00000459979 NEK8Q86SG6 692 aa20.92■□□□□ 0.94
HOXD3-204ENST00000459979 MYOCDQ8IZQ8 938 aa20.92■□□□□ 0.94
HOXD3-204ENST00000459979 C17orf80Q9BSJ5 609 aa20.92■□□□□ 0.94
HOXD3-204ENST00000459979 ZNF302Q9NR11 478 aa20.92■□□□□ 0.94
HOXD3-204ENST00000459979 TCEAL9Q9UHQ7 104 aa20.92■□□□□ 0.94
HOXD3-204ENST00000459979 TUBE1Q9UJT0 475 aa20.92■□□□□ 0.94
HOXD3-204ENST00000459979 BDP1A6H8Y1 2624 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 POTEB3A0JP26 581 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 BACH1O14867 736 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 EFCAB14O75071 495 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 MMP1P03956 469 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 PSAPP07602 524 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 KRT2P35908 639 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 SWSAP1Q6NVH7 229 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 POTEBQ6S5H4 581 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 B3GNT9Q6UX72 402 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 CCDC83Q8IWF9 413 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 ETNPPLQ8TBG4 499 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 ATP8B4Q8TF62 1192 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 UIMC1Q96RL1 719 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms