RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 TTC13Q8NBP0 860 aa9.57□□□□□ -0.88
NCSTN-209ENST00000459963 RSAD2Q8WXG1 361 aa9.57□□□□□ -0.88
NCSTN-209ENST00000459963 ATP6V0A1Q93050 837 aa9.57□□□□□ -0.88
NCSTN-209ENST00000459963 TCF25Q9BQ70 676 aa9.57□□□□□ -0.88
NCSTN-209ENST00000459963 SCNM1Q9BWG6 230 aa9.57□□□□□ -0.88
NCSTN-209ENST00000459963 FAM126AQ9BYI3 521 aaPredicted RBP9.57□□□□□ -0.88
NCSTN-209ENST00000459963 NGRNQ9NPE2 291 aaKnown RBP9.57□□□□□ -0.88
NCSTN-209ENST00000459963 DCP1AQ9NPI6 582 aaPredicted RBP9.57□□□□□ -0.88
NCSTN-209ENST00000459963 ENTPD7Q9NQZ7 604 aa9.57□□□□□ -0.88
NCSTN-209ENST00000459963 DENND4AQ7Z401 1863 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 GH1P01241 217 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 ZNF286BP0CG31 522 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 STARD6P59095 220 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 SWT1Q5T5J6 900 aaKnown RBP9.56□□□□□ -0.88
NCSTN-209ENST00000459963 KANK3Q6NY19 840 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 CCDC62Q6P9F0 684 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 CCDC149Q6ZUS6 474 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 RASGRP2Q7LDG7 609 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 CHST3Q7LGC8 479 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 WWC1Q8IX03 1113 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 RPAP2Q8IXW5 612 aaPredicted RBP9.56□□□□□ -0.88
NCSTN-209ENST00000459963 THNSL1Q8IYQ7 743 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 SLC44A3Q8N4M1 653 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 SDR42E1Q8WUS8 393 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
NCSTN-209ENST00000459963 CRNKL1Q9BZJ0 848 aaKnown RBP9.56□□□□□ -0.88
NCSTN-209ENST00000459963 LZTS1Q9Y250 596 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 IGSF10Q6WRI0 2623 aa9.56□□□□□ -0.88
NCSTN-209ENST00000459963 TTC3P53804 2025 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 MYH7BA7E2Y1 1941 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 MAGEB6P1A0A0J9YX57 407 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 C17orf102A2RUQ5 167 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 ARHGAP6O43182 974 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 EDNRBP24530 442 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 MAGEA9P43362 315 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 ZNF252P-AS1Q0IIN9 211 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 LY6KQ17RY6 165 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 CCDC158Q5M9N0 1113 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 SPOUT1Q5T280 376 aaKnown RBP9.55□□□□□ -0.88
NCSTN-209ENST00000459963 PROSER1Q86XN7 944 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 NPAS4Q8IUM7 802 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 SHDQ96IW2 340 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 MPHOSPH6Q99547 160 aaKnown RBP9.55□□□□□ -0.88
NCSTN-209ENST00000459963 MYL10Q9BUA6 226 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 NYAP2Q9P242 653 aa9.55□□□□□ -0.88
NCSTN-209ENST00000459963 KANSL1LA0AUZ9 987 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 TREHO43280 583 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 UBTFL1P0CB47 393 aaPredicted RBP9.54□□□□□ -0.88
NCSTN-209ENST00000459963 GHRP10912 638 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 NOVA1P51513 510 aaKnown RBP9.54□□□□□ -0.88
NCSTN-209ENST00000459963 PTPN14Q15678 1187 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 FAM26DQ5JW98 314 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 STPG1Q5TH74 334 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 TMED8Q6PL24 325 aaPredicted RBP9.54□□□□□ -0.88
NCSTN-209ENST00000459963 C16orf86Q6ZW13 317 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 TMEFF1Q8IYR6 380 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
NCSTN-209ENST00000459963 PRMT8Q9NR22 394 aaPredicted RBP9.54□□□□□ -0.88
NCSTN-209ENST00000459963 DZANK1Q9NVP4 752 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 PUF60Q9UHX1 559 aaKnown RBP9.54□□□□□ -0.88
NCSTN-209ENST00000459963 RAI2Q9Y5P3 530 aa9.54□□□□□ -0.88
NCSTN-209ENST00000459963 PTPDC1A2A3K4 754 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 TMEM232C9JQI7 657 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 GIPC1O14908 333 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 CLASP2O75122 1294 aaKnown RBP9.53□□□□□ -0.88
NCSTN-209ENST00000459963 PRB1P04280 392 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 STAG3L1P0CL83 205 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 BMP3P12645 472 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 HOXC8P31273 242 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 GATMP50440 423 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 STAT2P52630 851 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 FEZF2Q8TBJ5 459 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 LINC01599Q8WXQ3 324 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 OSBPL6Q9BZF3 934 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 EHMT1Q9H9B1 1298 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 TENM4Q6N022 2769 aa9.53□□□□□ -0.88
NCSTN-209ENST00000459963 USP9XQ93008 2570 aaPredicted RBP9.53□□□□□ -0.88
NCSTN-209ENST00000459963 MIA3Q5JRA6 1907 aa9.52□□□□□ -0.88
NCSTN-209ENST00000459963 C1QL1O75973 258 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 KRT38O76015 456 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 CHRNA1P02708 482 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 NRLP54845 237 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 PLCB3Q01970 1234 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 LPIN1Q14693 890 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 LETM2Q2VYF4 491 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 C12orf60Q5U649 245 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 TMC5Q6UXY8 1006 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.52□□□□□ -0.89
NCSTN-209ENST00000459963 ZNF605Q86T29 641 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 FAM160B2Q86V87 743 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 C12orf50Q8NA57 414 aaPredicted RBP9.52□□□□□ -0.89
NCSTN-209ENST00000459963 COLGALT1Q8NBJ5 622 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 PPTC7Q8NI37 304 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 NXPE3Q969Y0 559 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 EMID1Q96A84 441 aaPredicted RBP9.52□□□□□ -0.89
NCSTN-209ENST00000459963 ZNF512BQ96KM6 892 aaPredicted RBP9.52□□□□□ -0.89
NCSTN-209ENST00000459963 DDX23Q9BUQ8 820 aaKnown RBP9.52□□□□□ -0.89
NCSTN-209ENST00000459963 SLC2A4RGQ9NR83 387 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 CLIP2Q9UDT6 1046 aa9.52□□□□□ -0.89
NCSTN-209ENST00000459963 CCPG1Q9ULG6 757 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms