RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 DDX41Q9UJV9 622 aaKnown RBP9.76□□□□□ -0.85
RIF1-208ENST00000457745 GJD2Q9UKL4 321 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 GABRQQ9UN88 632 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 CTNND2Q9UQB3 1225 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 PCDHA2Q9Y5H9 948 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 NFASCO94856 1347 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 KDM3AQ9Y4C1 1321 aa9.76□□□□□ -0.85
RIF1-208ENST00000457745 FRMD3A2A2Y4 597 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 RHOBTB3O94955 611 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 EYA4O95677 639 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 GGPS1O95749 300 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 TBC1D8O95759 1140 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 HOXD13P35453 343 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 COPB2P35606 906 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 ADCYAP1R1P41586 468 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 PRCPP42785 496 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 VEGFBP49765 207 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 TRIM32Q13049 653 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 KLHL10Q6JEL2 608 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 RINT1Q6NUQ1 792 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 CNNM4Q6P4Q7 775 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 C1orf186Q6ZWK4 172 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 TRMT1LQ7Z2T5 733 aaKnown RBP9.75□□□□□ -0.85
RIF1-208ENST00000457745 SYT2Q8N9I0 419 aaPredicted RBP9.75□□□□□ -0.85
RIF1-208ENST00000457745 TRPV1Q8NER1 839 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 PPP1R13LQ8WUF5 828 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 ZBTB10Q96DT7 871 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 CDK5RAP3Q96JB5 506 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 FIZ1Q96SL8 496 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 CEP89Q96ST8 783 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 SENP7Q9BQF6 1050 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 RAB34Q9BZG1 259 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 MAF1Q9H063 256 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 CUEDC2Q9H467 287 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 TUFT1Q9NNX1 390 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
RIF1-208ENST00000457745 GABBR1Q9UBS5 961 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 MYH9P35579 1960 aaKnown RBP9.75□□□□□ -0.85
RIF1-208ENST00000457745 IGSF9BQ9UPX0 1349 aa9.75□□□□□ -0.85
RIF1-208ENST00000457745 MYH11P35749 1972 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 IGKV6D-21A0A0A0MT36 114 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 C2orf72A6NCS6 295 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 SLC15A5A6NIM6 579 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 SFI1A8K8P3 1242 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 SUPT20HL2P0C7V6 817 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 RARRES1P49788 294 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 APLP1P51693 650 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 CCNA1P78396 465 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 ARHGAP1Q07960 439 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 KCNB1Q14721 858 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 DEFB115Q30KQ5 88 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 HSDL1Q3SXM5 330 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 UTP14CQ5TAP6 766 aaKnown RBP9.74□□□□□ -0.85
RIF1-208ENST00000457745 ZNF658Q5TYW1 1059 aaPredicted RBP9.74□□□□□ -0.85
RIF1-208ENST00000457745 HAUS3Q68CZ6 603 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 ZNF746Q6NUN9 644 aaPredicted RBP9.74□□□□□ -0.85
RIF1-208ENST00000457745 SWSAP1Q6NVH7 229 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 KANK3Q6NY19 840 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 UNC13DQ70J99 1090 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 ANO5Q75V66 913 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 SV2BQ7L1I2 683 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 SFR1Q86XK3 245 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 ABRAQ8N0Z2 381 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 ADSSL1Q8N142 457 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 GIMAP8Q8ND71 665 aaPredicted RBP9.74□□□□□ -0.85
RIF1-208ENST00000457745 ERMNQ8TAM6 284 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 BSNDQ8WZ55 320 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 TRIM47Q96LD4 638 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 GSDMAQ96QA5 445 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 DUSP9Q99956 384 aaKnown RBP9.74□□□□□ -0.85
RIF1-208ENST00000457745 SEMA6BQ9H3T3 888 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 JPH1Q9HDC5 661 aaPredicted RBP9.74□□□□□ -0.85
RIF1-208ENST00000457745 ZCCHC17Q9NP64 241 aaKnown RBP9.74□□□□□ -0.85
RIF1-208ENST00000457745 SLC39A2Q9NP94 309 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 GPRC5CQ9NQ84 441 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 SAMSN1Q9NSI8 373 aaKnown RBP9.74□□□□□ -0.85
RIF1-208ENST00000457745 TBC1D22BQ9NU19 505 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 INTS13Q9NVM9 706 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 SLC9A2Q9UBY0 812 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 LOXHD1Q8IVV2 1947 aa9.74□□□□□ -0.85
RIF1-208ENST00000457745 RBM47A0AV96 593 aaKnown RBP9.73□□□□□ -0.85
RIF1-208ENST00000457745 WDR64B1ANS9 1081 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 SLC26A4O43511 780 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 CA12O43570 354 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 SMC2O95347 1197 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 ATG7O95352 703 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 LYPLA2O95372 231 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 MYBP10242 640 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 IDEP14735 1019 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 SMPD1P17405 629 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 CYP2B6P20813 491 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 MAPK4P31152 587 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 CYP2C19P33261 490 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 KRT76Q01546 638 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 KCNA1Q09470 495 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 MAP2K5Q13163 448 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 APTXQ7Z2E3 356 aaKnown RBP9.73□□□□□ -0.85
RIF1-208ENST00000457745 IRF2BP1Q8IU81 584 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms