RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ZNFX1Q9P2E3 1918 aaKnown RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 RIF1Q5UIP0 2472 aaKnown RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 H0Y858 1186 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 HAS3O00219 553 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 EEF2P13639 858 aaKnown RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 AKR1B1P15121 316 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 HOXC8P31273 242 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 BMPR1AP36894 532 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 TXLNAP40222 546 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 RBM25P49756 843 aaKnown RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 DLX2Q07687 328 aaPredicted RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 ST3GAL2Q16842 350 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 TCTN1Q2MV58 587 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 PLEKHG4Q58EX7 1191 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 BRDTQ58F21 947 aaPredicted RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 C16orf86Q6ZW13 317 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 CHSY3Q70JA7 882 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 SYT9Q86SS6 491 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 CCDC105Q8IYK2 499 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 GOLGA6L1Q8N7Z2 621 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 TMEM105Q8N8V8 129 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 PPP2R3CQ969Q6 453 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 CCDC97Q96F63 343 aaPredicted RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 CDCA3Q99618 268 aaPredicted RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 DCP1AQ9NPI6 582 aaPredicted RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 A1CFQ9NQ94 594 aaKnown RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 TLR9Q9NR96 1032 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 FEM1BQ9UK73 627 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 PNMA2Q9UL42 364 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.54□□□□□ -2
NEDD1-204ENST00000457368 PTPRSQ13332 1948 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 CHD7Q9P2D1 2997 aa2.54□□□□□ -2
NEDD1-204ENST00000457368 RAD50Q92878 1312 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 LMNAP02545 664 aaKnown RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 POLR3DP05423 398 aaPredicted RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 CKBP12277 381 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 ATP4AP20648 1035 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 MAP2K3P46734 347 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 RRP1P56182 461 aaKnown RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 KCNC3Q14003 757 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 MBTPS1Q14703 1052 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 ACAP1Q15027 740 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 CCDC158Q5M9N0 1113 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 FAM83BQ5T0W9 1011 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 C12orf60Q5U649 245 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 FRMD5Q7Z6J6 570 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 FCHSD1Q86WN1 690 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 ANKRD35Q8N283 1001 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 GMCL1P1Q8NEA9 526 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 RASGRP4Q8TDF6 673 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 CRNKL1Q9BZJ0 848 aaKnown RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 ATP8A2Q9NTI2 1148 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 GTF2IRD1Q9UHL9 959 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 HCN2Q9UL51 889 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 EPG5Q9HCE0 2579 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 PLIN4Q96Q06 1357 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 GREB1LQ9C091 1923 aaPredicted RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 CDH23Q9H251 3354 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 ZFHX2Q9C0A1 2572 aaPredicted RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 SFI1A8K8P3 1242 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 NDUFB10O96000 172 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 GNAI3P08754 354 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 CT47B1P0C2W7 299 aaPredicted RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 ADH6P28332 368 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 GATA4P43694 442 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 CDK8P49336 464 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 CNTN2Q02246 1040 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 UBE3AQ05086 875 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 CAMK1Q14012 370 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 TNNI3KQ59H18 835 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 GORABQ5T7V8 394 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 TMCO4Q5TGY1 634 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 KIAA0319Q5VV43 1072 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 PDE12Q6L8Q7 609 aaKnown RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 RASGRP2Q7LDG7 609 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 FAM160B2Q86V87 743 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 ZDHHC14Q8IZN3 488 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 SPICE1Q8N0Z3 855 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 LRRC47Q8N1G4 583 aaKnown RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 PLPP7Q8NBV4 271 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 APBB2Q92870 758 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 BTBD6Q96KE9 485 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 HAUS7Q99871 368 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 KRTAP17-1Q9BYP8 105 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 S1PR5Q9H228 398 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 ATXN7L1Q9ULK2 861 aaPredicted RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 SORCS3Q9UPU3 1222 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 USP20Q9Y2K6 914 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 NOP58Q9Y2X3 529 aaKnown RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 USP15Q9Y4E8 981 aaPredicted RBP2.53□□□□□ -2
NEDD1-204ENST00000457368 PCDHGC5Q9Y5F6 944 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 FPGT-TNNI3KV9GXZ4 949 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 SPTBN4Q9H254 2564 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 NCOR2Q9Y618 2525 aa2.53□□□□□ -2
NEDD1-204ENST00000457368 TCRBV5S4A2TA0A5A2 114 aa2.53□□□□□ -2.01
NEDD1-204ENST00000457368 PRR5-ARHGAP8B1AHC4 643 aa2.53□□□□□ -2.01
NEDD1-204ENST00000457368 F5H6K3 240 aa2.53□□□□□ -2.01
NEDD1-204ENST00000457368 ADRB1P08588 477 aa2.53□□□□□ -2.01
NEDD1-204ENST00000457368 EPXP11678 715 aa2.53□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms