RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
TOP3B-212ENST00000456075 OATP04181 439 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 MCM7P33993 719 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 KCNJ6P48051 423 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 TRIM71Q2Q1W2 868 aaKnown RBP11.65□□□□□ -0.54
TOP3B-212ENST00000456075 ZNF484Q5JVG2 852 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 NCAPH2Q6IBW4 605 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 NOSTRINQ8IVI9 506 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 TRAPPC12Q8WVT3 735 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
TOP3B-212ENST00000456075 HERVK_113Q902F9 699 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 WNT8BQ93098 351 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 LRCH3Q96II8 777 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 KCNMB3Q9NPA1 279 aa11.65□□□□□ -0.54
TOP3B-212ENST00000456075 MAFBQ9Y5Q3 323 aaPredicted RBP11.65□□□□□ -0.54
TOP3B-212ENST00000456075 COL1A2P08123 1366 aa11.65□□□□□ -0.55
TOP3B-212ENST00000456075 IGSF9BQ9UPX0 1349 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-212ENST00000456075 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-212ENST00000456075 MBLAC1A4D2B0 266 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-212ENST00000456075 SOX1O00570 391 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-212ENST00000456075 BAIAP3O94812 1187 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 ADAM17P78536 824 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 PRKCEQ02156 737 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 IER5Q5VY09 327 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 CNKSR3Q6P9H4 555 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 MTHFD1LQ6UB35 978 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 RUFY4Q6ZNE9 571 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 METTL13Q8N6R0 699 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 DNAJB3Q8WWF6 145 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-212ENST00000456075 PCDHA12Q9UN75 941 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 PCDHA2Q9Y5H9 948 aa11.64□□□□□ -0.55
TOP3B-212ENST00000456075 EFCAB14O75071 495 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
TOP3B-212ENST00000456075 PDCP20941 246 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 KLRC1P26715 233 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 TMOD1P28289 359 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 TXKP42681 527 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 TRAPPC10P48553 1259 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 PSMC5P62195 406 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 SMAD3P84022 425 aaKnown RBP11.63□□□□□ -0.55
TOP3B-212ENST00000456075 ORC2Q13416 577 aaPredicted RBP11.63□□□□□ -0.55
TOP3B-212ENST00000456075 IKBKEQ14164 716 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 XKR3Q5GH77 459 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 TTC38Q5R3I4 469 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 MARCH8Q5T0T0 291 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 LARP1BQ659C4 914 aaKnown RBP11.63□□□□□ -0.55
TOP3B-212ENST00000456075 HSCBQ8IWL3 235 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 BANK1Q8NDB2 785 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 SEPT8Q92599 483 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 CCDC43Q96MW1 224 aaKnown RBP11.63□□□□□ -0.55
TOP3B-212ENST00000456075 CXXC1Q9P0U4 656 aaPredicted RBP11.63□□□□□ -0.55
TOP3B-212ENST00000456075 VAV3Q9UKW4 847 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 TANC1Q9C0D5 1861 aa11.63□□□□□ -0.55
TOP3B-212ENST00000456075 KAT6AQ92794 2004 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 SMIM35A0A1B0GVV1 85 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 DDX11L8A8MPP1 907 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 K7ELQ4 463 aaPredicted RBP11.62□□□□□ -0.55
TOP3B-212ENST00000456075 MAGEB2O15479 319 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 NBNO60934 754 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 CXCL10P02778 98 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 P4HBP07237 508 aaKnown RBP11.62□□□□□ -0.55
TOP3B-212ENST00000456075 ATP2A2P16615 1042 aaKnown RBP11.62□□□□□ -0.55
TOP3B-212ENST00000456075 QARSP47897 775 aaKnown RBP11.62□□□□□ -0.55
TOP3B-212ENST00000456075 MRPS6P82932 125 aaKnown RBP11.62□□□□□ -0.55
TOP3B-212ENST00000456075 TBC1D8BQ0IIM8 1120 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 ZNF174Q15697 407 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 UGCGQ16739 394 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 TMEM266Q2M3C6 531 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 GPR153Q6NV75 609 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 RPAINQ86UA6 219 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 NME8Q8N427 588 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 HAS1Q92839 578 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 ZBTB10Q96DT7 871 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 SCLT1Q96NL6 688 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 MAP7D2Q96T17 732 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 SLC9A7Q96T83 725 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 TTC12Q9H892 705 aaPredicted RBP11.62□□□□□ -0.55
TOP3B-212ENST00000456075 MSRAQ9UJ68 235 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 GINS2Q9Y248 185 aa11.62□□□□□ -0.55
TOP3B-212ENST00000456075 ABHD14A-ACY1A0A1B0GW23 586 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 VPS37CA5D8V6 355 aaPredicted RBP11.61□□□□□ -0.55
TOP3B-212ENST00000456075 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 ZNF862O60290 1169 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 OR52Z1P0C646 297 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 ATP4AP20648 1035 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.55
TOP3B-212ENST00000456075 DNM2P50570 870 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 CUL4AQ13619 759 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 EPHA7Q15375 998 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 RAB30Q15771 203 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 MTERF2Q49AM1 385 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 RASIP1Q5U651 963 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 TRAF7Q6Q0C0 670 aa11.61□□□□□ -0.55
TOP3B-212ENST00000456075 B3GNT9Q6UX72 402 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms