RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CDY1Q9Y6F8 540 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 KDRP35968 1356 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 ORC4O43929 436 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 CIAO1O76071 339 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 HK2P52789 917 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 ROPN1BQ9BZX4 212 aaPredicted RBP5.59□□□□□ -1.52
CSMD3-204ENST00000455883 KLC2Q9H0B6 622 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 MRPL44Q9H9J2 332 aaKnown RBP5.59□□□□□ -1.52
CSMD3-204ENST00000455883 ROPN1Q9HAT0 212 aaPredicted RBP5.59□□□□□ -1.52
CSMD3-204ENST00000455883 CBX8Q9HC52 389 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 STAP2Q9UGK3 403 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 MAP3K2Q9Y2U5 619 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 ADGRA2Q96PE1 1338 aa5.59□□□□□ -1.52
CSMD3-204ENST00000455883 MYO7BQ6PIF6 2116 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TNNC2P02585 160 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PNMA6AP0CW24 399 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ATP5JP18859 108 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SLC1A1P43005 524 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TP53BP2Q13625 1128 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ESCO1Q5FWF5 840 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TPTE2Q6XPS3 522 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TRIML2Q8N7C3 387 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PCYOX1LQ8NBM8 494 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SNX19Q92543 992 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 THUMPD2Q9BTF0 503 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 C19orf44Q9H6X5 657 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ZSWIM4Q9H7M6 989 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SETD1AO15047 1707 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 LIN7AO14910 233 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 POLR2DO15514 142 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 KLHL2O95198 593 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 CCDC159P0C7I6 412 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TMED10P49755 219 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ST13P50502 369 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 NLRX1Q86UT6 975 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 FAM89AQ96GI7 184 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 FANCEQ9HB96 536 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 AASDHPPTQ9NRN7 309 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 E9PCH4 1651 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 EXOC1LA0A1B0GW35 172 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SF3A3Q12874 501 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 IFT88Q13099 833 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 CEP55Q53EZ4 464 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 CCDC126Q96EE4 140 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 LMBRD1Q9NUN5 540 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ADAM21Q9UKJ8 722 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SERPING1P05155 500 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 STAT2P52630 851 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 RAD51AP2Q09MP3 1159 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 NR5A1Q13285 461 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 DHX58Q96C10 678 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ADPGKQ9BRR6 497 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 BRD8Q9H0E9 1235 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 DDX21Q9NR30 783 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 MORC3Q14149 939 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 JADE3Q92613 823 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 APOL4Q9BPW4 351 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PACSIN1Q9BY11 444 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 IL1RAPL2Q9NP60 686 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PPANQ9NQ55 473 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 BSDC1Q9NW68 430 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 GYG2O15488 501 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ITGA1P56199 1179 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ARL4CP56559 192 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PDE4DQ08499 809 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TUBA3CQ13748 450 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PDE1CQ14123 709 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PKN2Q16513 984 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 CHURC1Q8WUH1 139 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 HESX1Q9UBX0 185 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 STOML2Q9UJZ1 356 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 GMNCA6NCL1 334 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 MMP14P50281 582 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SLC39A14Q15043 492 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TIMM50Q3ZCQ8 353 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 DCAF17Q5H9S7 520 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SLC9C2Q5TAH2 1124 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 C11orf88Q6PI97 169 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 CCNJLQ8IV13 435 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PHACTR3Q96KR7 559 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 CCDC17Q96LX7 622 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SH3GL1Q99961 368 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SF3B1O75533 1304 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 CHD3Q12873 2000 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 A6NJR5 290 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 M0QZ92 97 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 LDHBP07195 334 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TRPC1P48995 793 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SERPINB8P50452 374 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PAPOLAP51003 745 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 THOC7Q6I9Y2 204 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 C16orf89Q6UX73 402 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PRR23BQ6ZRT6 265 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 SCFD1Q8WVM8 642 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 HIC2Q96JB3 615 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 AZI2Q9H6S1 392 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 DDX25Q9UHL0 483 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 AFMP43652 599 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 UBE3CQ15386 1083 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms