RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 VN1R2Q8NFZ6 395 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 SUSD6Q92537 303 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 NEK1Q96PY6 1258 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 PCDHB12Q9Y5F1 795 aa26.68■■□□□ 1.86
PTPRA-208ENST00000455631 ITGB5P18084 799 aa26.67■■□□□ 1.86
PTPRA-208ENST00000455631 MTMR1Q13613 665 aa26.67■■□□□ 1.86
PTPRA-208ENST00000455631 SART3Q15020 963 aaKnown RBP26.67■■□□□ 1.86
PTPRA-208ENST00000455631 CATIPQ7Z7H3 387 aa26.67■■□□□ 1.86
PTPRA-208ENST00000455631 ZBTB33Q86T24 672 aa26.67■■□□□ 1.86
PTPRA-208ENST00000455631 CHD1LQ86WJ1 897 aa26.67■■□□□ 1.86
PTPRA-208ENST00000455631 RRP36Q96EU6 259 aaKnown RBP26.67■■□□□ 1.86
PTPRA-208ENST00000455631 TRPC6Q9Y210 931 aa26.67■■□□□ 1.86
PTPRA-208ENST00000455631 FNDC1Q4ZHG4 1894 aaPredicted RBP26.66■■□□□ 1.86
PTPRA-208ENST00000455631 CFAP54Q96N23 3096 aa26.66■■□□□ 1.86
PTPRA-208ENST00000455631 FSD2A1L4K1 749 aa26.66■■□□□ 1.86
PTPRA-208ENST00000455631 UBE3AQ05086 875 aa26.66■■□□□ 1.86
PTPRA-208ENST00000455631 DUSP6Q16828 381 aa26.66■■□□□ 1.86
PTPRA-208ENST00000455631 RALYLQ86SE5 291 aaKnown RBP26.66■■□□□ 1.86
PTPRA-208ENST00000455631 ATP8B4Q8TF62 1192 aa26.66■■□□□ 1.86
PTPRA-208ENST00000455631 TMX1Q9H3N1 280 aa26.66■■□□□ 1.86
PTPRA-208ENST00000455631 AAASQ9NRG9 546 aa26.66■■□□□ 1.86
PTPRA-208ENST00000455631 SEC63Q9UGP8 760 aaKnown RBP26.66■■□□□ 1.86
PTPRA-208ENST00000455631 TMEM266Q2M3C6 531 aa26.65■■□□□ 1.86
PTPRA-208ENST00000455631 SMC5Q8IY18 1101 aa26.65■■□□□ 1.86
PTPRA-208ENST00000455631 TRAPPC12Q8WVT3 735 aa26.65■■□□□ 1.86
PTPRA-208ENST00000455631 CDCA3Q99618 268 aaPredicted RBP26.65■■□□□ 1.86
PTPRA-208ENST00000455631 CELF4Q9BZC1 486 aaKnown RBP26.65■■□□□ 1.86
PTPRA-208ENST00000455631 AZI2Q9H6S1 392 aa26.65■■□□□ 1.86
PTPRA-208ENST00000455631 PCDHB7Q9Y5E2 793 aa26.65■■□□□ 1.86
PTPRA-208ENST00000455631 PLXNA3P51805 1871 aa26.65■■□□□ 1.86
PTPRA-208ENST00000455631 H0Y858 1186 aa26.64■■□□□ 1.86
PTPRA-208ENST00000455631 FGF18O76093 207 aa26.64■■□□□ 1.86
PTPRA-208ENST00000455631 SRGAP2BP0DMP2 458 aa26.64■■□□□ 1.86
PTPRA-208ENST00000455631 SP100P23497 879 aaPredicted RBP26.64■■□□□ 1.86
PTPRA-208ENST00000455631 SARSP49591 514 aaKnown RBP26.64■■□□□ 1.86
PTPRA-208ENST00000455631 NFX1Q12986 1120 aaKnown RBP26.64■■□□□ 1.86
PTPRA-208ENST00000455631 THNSL1Q8IYQ7 743 aa26.64■■□□□ 1.86
PTPRA-208ENST00000455631 PCYT2Q99447 389 aa26.64■■□□□ 1.86
PTPRA-208ENST00000455631 SPZ1Q9BXG8 430 aa26.64■■□□□ 1.86
PTPRA-208ENST00000455631 JPH1Q9HDC5 661 aaPredicted RBP26.64■■□□□ 1.86
PTPRA-208ENST00000455631 PCDHA2Q9Y5H9 948 aa26.64■■□□□ 1.86
PTPRA-208ENST00000455631 TBKBP1A7MCY6 615 aa26.63■■□□□ 1.85
PTPRA-208ENST00000455631 TNPO1Q92973 898 aaKnown RBP26.63■■□□□ 1.85
PTPRA-208ENST00000455631 APOL5Q9BWW9 433 aa26.63■■□□□ 1.85
PTPRA-208ENST00000455631 UBIAD1Q9Y5Z9 338 aa26.63■■□□□ 1.85
PTPRA-208ENST00000455631 U3KPZ7 1027 aaPredicted RBP26.63■■□□□ 1.85
PTPRA-208ENST00000455631 CACNA1HO95180 2353 aa26.62■■□□□ 1.85
PTPRA-208ENST00000455631 PDGFBP01127 241 aaPredicted RBP26.62■■□□□ 1.85
PTPRA-208ENST00000455631 CYP21A2P08686 494 aa26.62■■□□□ 1.85
PTPRA-208ENST00000455631 ERVFC1P60507 584 aa26.62■■□□□ 1.85
PTPRA-208ENST00000455631 KRT76Q01546 638 aa26.62■■□□□ 1.85
PTPRA-208ENST00000455631 CTCFLQ8NI51 663 aaPredicted RBP26.62■■□□□ 1.85
PTPRA-208ENST00000455631 MYL10Q9BUA6 226 aa26.62■■□□□ 1.85
PTPRA-208ENST00000455631 TMEM260Q9NX78 707 aa26.62■■□□□ 1.85
PTPRA-208ENST00000455631 HCSTQ9UBK5 93 aa26.62■■□□□ 1.85
PTPRA-208ENST00000455631 GINS2Q9Y248 185 aa26.62■■□□□ 1.85
PTPRA-208ENST00000455631 TECP42680 631 aa26.61■■□□□ 1.85
PTPRA-208ENST00000455631 NUCB1Q02818 461 aa26.61■■□□□ 1.85
PTPRA-208ENST00000455631 PLPP4Q5VZY2 271 aa26.61■■□□□ 1.85
PTPRA-208ENST00000455631 NCOA7Q8NI08 942 aa26.61■■□□□ 1.85
PTPRA-208ENST00000455631 PSTPIP2Q9H939 334 aa26.61■■□□□ 1.85
PTPRA-208ENST00000455631 SLC9A2Q9UBY0 812 aa26.61■■□□□ 1.85
PTPRA-208ENST00000455631 KDM3AQ9Y4C1 1321 aa26.61■■□□□ 1.85
PTPRA-208ENST00000455631 MGEA5O60502 916 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 KIF5BP33176 963 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 PLCB4Q15147 1175 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 UBE2SQ16763 222 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 PDE12Q6L8Q7 609 aaKnown RBP26.6■■□□□ 1.85
PTPRA-208ENST00000455631 ANKRD54Q6NXT1 300 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 COLGALT1Q8NBJ5 622 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 RIPOR3Q96MK2 946 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 S1PR5Q9H228 398 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 RWDD1Q9H446 243 aaPredicted RBP26.6■■□□□ 1.85
PTPRA-208ENST00000455631 JADE2Q9NQC1 790 aa26.6■■□□□ 1.85
PTPRA-208ENST00000455631 SMIM35A0A1B0GVV1 85 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 DENND3A2RUS2 1198 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 SPDYE3A6NKU9 549 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 FSCN2O14926 492 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 APOBRQ0VD83 1088 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 FAM102BQ5T8I3 360 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 LLGL2Q6P1M3 1020 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 ZNF654Q8IZM8 581 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 NME8Q8N427 588 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 ADAM2Q99965 735 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 ERVK-5Q9HDB9 667 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 TSHZ2Q9NRE2 1034 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 C1orf112Q9NSG2 853 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 TAF6LQ9Y6J9 622 aa26.59■■□□□ 1.85
PTPRA-208ENST00000455631 E7EWF7 191 aa26.58■■□□□ 1.85
PTPRA-208ENST00000455631 MAFGO15525 162 aa26.58■■□□□ 1.85
PTPRA-208ENST00000455631 NUBP1P53384 320 aa26.58■■□□□ 1.85
PTPRA-208ENST00000455631 FOXK2Q01167 660 aa26.58■■□□□ 1.85
PTPRA-208ENST00000455631 MTHFD1LQ6UB35 978 aa26.58■■□□□ 1.85
PTPRA-208ENST00000455631 TMEM184AQ6ZMB5 413 aa26.58■■□□□ 1.85
PTPRA-208ENST00000455631 ENTPD7Q9NQZ7 604 aa26.58■■□□□ 1.85
PTPRA-208ENST00000455631 TYW1Q9NV66 732 aaKnown RBP26.58■■□□□ 1.85
PTPRA-208ENST00000455631 RNF216Q9NWF9 866 aaPredicted RBP26.58■■□□□ 1.85
PTPRA-208ENST00000455631 ZFHX2Q9C0A1 2572 aaPredicted RBP26.58■■□□□ 1.85
PTPRA-208ENST00000455631 GALR2O43603 387 aaPredicted RBP26.57■■□□□ 1.84
PTPRA-208ENST00000455631 RPS6KA5O75582 802 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms