RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 NFXL1Q6ZNB6 911 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SMRP1Q8NCR6 262 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NCOA7Q8NI08 942 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CTCFLQ8NI51 663 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 IGDCC4Q8TDY8 1250 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 POF1BQ8WVV4 589 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CLP1Q92989 425 aaKnown RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CUL5Q93034 780 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ZNF689Q96CS4 500 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ZNF668Q96K58 619 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RPGRIP1Q96KN7 1286 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SPZ1Q9BXG8 430 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SMOC2Q9H3U7 446 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 JPH1Q9HDC5 661 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TMEM260Q9NX78 707 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ERAP1Q9NZ08 941 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PLAGL2Q9UPG8 496 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 U3KPZ7 1027 aaPredicted RBP6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FAM186AA6NE01 2351 aa6.88□□□□□ -1.31
HLA-DPA3-207ENST00000454398 IGSF9BQ9UPX0 1349 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SGSM2O43147 1006 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CCNE2O96020 404 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SCG2P13521 617 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ACTR2P61160 394 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SART3Q15020 963 aaKnown RBP6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PUS10Q3MIT2 529 aaKnown RBP6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PLPP4Q5VZY2 271 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TMTC3Q6ZXV5 915 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NLRX1Q86UT6 975 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MSLNLQ96KJ4 702 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MAF1Q9H063 256 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PSTPIP2Q9H939 334 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CDHR5Q9HBB8 845 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PRKAG3Q9UGI9 489 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PADI3Q9ULW8 664 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FAM50BQ9Y247 325 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TRPV2Q9Y5S1 764 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 UBIAD1Q9Y5Z9 338 aa6.87□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PLXNA3P51805 1871 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TMEM221A6NGB7 291 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CCDC69A6NI79 296 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SPDYE3A6NKU9 549 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TBKBP1A7MCY6 615 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 M0R296 226 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PIK3CDO00329 1044 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 STAM2O75886 525 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 WEE2P0C1S8 567 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 KIF5BP33176 963 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NFX1Q12986 1120 aaKnown RBP6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 KIZQ2M2Z5 673 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 HERC4Q5GLZ8 1057 aaPredicted RBP6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SPOUT1Q5T280 376 aaKnown RBP6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FAM102BQ5T8I3 360 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CASC1Q6TDU7 716 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RSPH3Q86UC2 560 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TICAM2Q86XR7 235 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NPAS4Q8IUM7 802 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CCDC60Q8IWA6 550 aaPredicted RBP6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CMTR2Q8IYT2 770 aaKnown RBP6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SPPL3Q8TCT6 385 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SEPT1Q8WYJ6 367 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 POP1Q99575 1024 aaKnown RBP6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 OSMRQ99650 979 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SENP7Q9BQF6 1050 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 LMAN2LQ9H0V9 348 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TSHZ2Q9NRE2 1034 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 KCNH7Q9NS40 1196 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MAP3K20Q9NYL2 800 aaKnown RBP6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SLC9A2Q9UBY0 812 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PCDHA6Q9UN73 950 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NOC2LQ9Y3T9 749 aaKnown RBP6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 PCDHA8Q9Y5H6 950 aa6.86□□□□□ -1.31
HLA-DPA3-207ENST00000454398 EP300Q09472 2414 aaPredicted RBP6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 GPR179Q6PRD1 2367 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ZBTB42B2RXF5 422 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 M0QZ92 97 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 BACH1O14867 736 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SLC27A2O14975 620 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 EDIL3O43854 480 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 VTNP04004 478 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NT5C2P49902 561 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 CLCN3P51790 818 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 NAPAP54920 295 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ERVFC1P60507 584 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 KRT76Q01546 638 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TCF15Q12870 199 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ADAM15Q13444 863 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 TRIM67Q6ZTA4 783 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 FAM228AQ86W67 206 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 THNSL1Q8IYQ7 743 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 EFHBQ8N7U6 833 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 RNF169Q8NCN4 708 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 MICAL1Q8TDZ2 1067 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ADAM2Q99965 735 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 ANO3Q9BYT9 981 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 LSG1Q9H089 658 aaKnown RBP6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 SMARCAD1Q9H4L7 1026 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 AZI2Q9H6S1 392 aa6.85□□□□□ -1.31
HLA-DPA3-207ENST00000454398 AGO4Q9HCK5 861 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms