RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 CSRNP2Q9H175 543 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 TRIM39Q9HCM9 518 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 ADAM29Q9UKF5 820 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 ZDHHC9Q9Y397 364 aa6.72□□□□□ -1.33
CUL3-208ENST00000454323 ALDH1L1O75891 902 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 DNAJC8O75937 253 aaPredicted RBP6.71□□□□□ -1.34
CUL3-208ENST00000454323 CHGBP05060 677 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 INHBCP55103 352 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 TBX4P57082 545 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 FAM50AQ14320 339 aaKnown RBP6.71□□□□□ -1.34
CUL3-208ENST00000454323 NFE2Q16621 373 aaPredicted RBP6.71□□□□□ -1.34
CUL3-208ENST00000454323 ZNF568Q3ZCX4 644 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 DDX46Q7L014 1031 aaKnown RBP6.71□□□□□ -1.34
CUL3-208ENST00000454323 Q8N1Y9 231 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 BVESQ8NE79 360 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 SLC7A14Q8TBB6 771 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 TRMT2BQ96GJ1 504 aaKnown RBP6.71□□□□□ -1.34
CUL3-208ENST00000454323 ZSWIM3Q96MP5 696 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 LGR4Q9BXB1 951 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 GABBR1Q9UBS5 961 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 TCEAL9Q9UHQ7 104 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 AKT3Q9Y243 479 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 RIPOR2Q9Y4F9 1068 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
CUL3-208ENST00000454323 X6R8D5 127 aa6.71□□□□□ -1.34
CUL3-208ENST00000454323 PHLDB1Q86UU1 1377 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 HGSO14964 777 aaPredicted RBP6.7□□□□□ -1.34
CUL3-208ENST00000454323 TBX1O43435 398 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 MAFKO60675 156 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 NPTXRO95502 500 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 GUCY2FP51841 1108 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 EPHB1P54762 984 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 MLLT6P55198 1093 aaPredicted RBP6.7□□□□□ -1.34
CUL3-208ENST00000454323 SCRN1Q12765 414 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 TTF1Q15361 905 aaPredicted RBP6.7□□□□□ -1.34
CUL3-208ENST00000454323 E4F1Q66K89 784 aaPredicted RBP6.7□□□□□ -1.34
CUL3-208ENST00000454323 AHI1Q8N157 1196 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 PPM1KQ8N3J5 372 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 GIMAP8Q8ND71 665 aaPredicted RBP6.7□□□□□ -1.34
CUL3-208ENST00000454323 GSTCDQ8NEC7 633 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 ATL2Q8NHH9 583 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 ZCCHC14Q8WYQ9 949 aaKnown RBP6.7□□□□□ -1.34
CUL3-208ENST00000454323 EDAQ92838 391 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 ADOQ96SZ5 270 aa6.7□□□□□ -1.34
CUL3-208ENST00000454323 PLEKHD1A6NEE1 506 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 NOP56O00567 594 aaKnown RBP6.69□□□□□ -1.34
CUL3-208ENST00000454323 CPEP16870 476 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 PTH1RQ03431 593 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 TRIM59Q8IWR1 403 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 DPF3Q92784 378 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 PPP1R14AQ96A00 147 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 ZNF503Q96F45 646 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 TRIM8Q9BZR9 551 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 SFMBT1Q9UHJ3 866 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 EMC9Q9Y3B6 208 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 PCDHB4Q9Y5E5 795 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 SLC4A7Q9Y6M7 1214 aa6.69□□□□□ -1.34
CUL3-208ENST00000454323 DLX3O60479 287 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 EFCAB14O75071 495 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 GABREP78334 506 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 KCNAB2Q13303 367 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 PCBP1Q15365 356 aaKnown RBP eCLIP6.68□□□□□ -1.34
CUL3-208ENST00000454323 TEPPQ6URK8 271 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 PHOSPHO1Q8TCT1 267 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 TSR2Q969E8 191 aaKnown RBP6.68□□□□□ -1.34
CUL3-208ENST00000454323 TMEM169Q96HH4 297 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 LMF1Q96S06 567 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 ASPSCR1Q9BZE9 553 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 MTFR1LQ9H019 292 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 SLC52A2Q9HAB3 445 aa6.68□□□□□ -1.34
CUL3-208ENST00000454323 EIF4G1Q04637 1599 aaKnown RBP6.68□□□□□ -1.34
CUL3-208ENST00000454323 LOC102724159A0A0B4J2E5 919 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.67□□□□□ -1.34
CUL3-208ENST00000454323 TPD52L2O43399 206 aaKnown RBP6.67□□□□□ -1.34
CUL3-208ENST00000454323 TSPAN6O43657 245 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 PRC1O43663 620 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 ASLP04424 464 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 COMTP21964 271 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 MCL1Q07820 350 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 PWP2Q15269 919 aaKnown RBP6.67□□□□□ -1.34
CUL3-208ENST00000454323 DHCR24Q15392 516 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 CEP68Q76N32 757 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 BRAPQ7Z569 592 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 NECAB2Q7Z6G3 386 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 FGD2Q7Z6J4 655 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 REXO1L1PQ8IX06 675 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 LEO1Q8WVC0 666 aaPredicted RBP6.67□□□□□ -1.34
CUL3-208ENST00000454323 SCLYQ96I15 445 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 CYP26B1Q9NR63 512 aa6.67□□□□□ -1.34
CUL3-208ENST00000454323 TNPO3Q9Y5L0 923 aaKnown RBP6.67□□□□□ -1.34
CUL3-208ENST00000454323 H7BY64 318 aa6.66□□□□□ -1.34
CUL3-208ENST00000454323 KATNA1O75449 491 aa6.66□□□□□ -1.34
CUL3-208ENST00000454323 KCNH1O95259 989 aa6.66□□□□□ -1.34
CUL3-208ENST00000454323 LSM12Q3MHD2 195 aaKnown RBP6.66□□□□□ -1.34
CUL3-208ENST00000454323 USP39Q53GS9 565 aaKnown RBP6.66□□□□□ -1.34
CUL3-208ENST00000454323 RNF219Q5W0B1 726 aaPredicted RBP6.66□□□□□ -1.34
CUL3-208ENST00000454323 MBLAC2Q68D91 279 aa6.66□□□□□ -1.34
CUL3-208ENST00000454323 LHFPL2Q6ZUX7 228 aa6.66□□□□□ -1.34
CUL3-208ENST00000454323 DNAJC10Q8IXB1 793 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms