RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PPTC7Q8NI37 304 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 PPP1R13LQ8WUF5 828 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 PPM1EQ8WY54 764 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 KAT2BQ92831 832 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 SCLYQ96I15 445 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 SDF4Q9BRK5 362 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 TSPYL2Q9H2G4 693 aaPredicted RBP17.64■□□□□ 0.41
VCX3B-204ENST00000453306 TTC12Q9H892 705 aaPredicted RBP17.64■□□□□ 0.41
VCX3B-204ENST00000453306 PRDM6Q9NQX0 595 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 TRMT13Q9NUP7 481 aaKnown RBP17.64■□□□□ 0.41
VCX3B-204ENST00000453306 FBXO2Q9UK22 296 aaPredicted RBP17.64■□□□□ 0.41
VCX3B-204ENST00000453306 PCDHA11Q9Y5I1 949 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 VCANP13611 3396 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 IGKV6D-21A0A0A0MT36 114 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 PP2D1A8MPX8 630 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 CHMP2AO43633 222 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 ATP2A2P16615 1042 aaKnown RBP17.63■□□□□ 0.41
VCX3B-204ENST00000453306 TECP42680 631 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 PTPN11Q06124 597 aaPredicted RBP17.63■□□□□ 0.41
VCX3B-204ENST00000453306 PPP2R5CQ13362 524 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 PPP2R2DQ66LE6 453 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 TRIM50Q86XT4 487 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 RETREG2Q8NC44 543 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 GIMAP8Q8ND71 665 aaPredicted RBP17.63■□□□□ 0.41
VCX3B-204ENST00000453306 C16orf70Q9BSU1 422 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 TEKT3Q9BXF9 490 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 THEGQ9P2T0 379 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 RCOR1Q9UKL0 485 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 PCDHA12Q9UN75 941 aa17.63■□□□□ 0.41
VCX3B-204ENST00000453306 POTEMA6NI47 508 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 CYP2C9P11712 490 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 ATP4AP20648 1035 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 CDC25AP30304 524 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 PRPHP41219 470 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 BFSP2Q13515 415 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 UGCGQ16739 394 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 ZNF746Q6NUN9 644 aaPredicted RBP17.62■□□□□ 0.41
VCX3B-204ENST00000453306 USP49Q70CQ1 688 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 SLFN12Q8IYM2 578 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 SEPT1Q8WYJ6 367 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 TNPO1Q92973 898 aaKnown RBP17.62■□□□□ 0.41
VCX3B-204ENST00000453306 ZNF396Q96N95 335 aaPredicted RBP17.62■□□□□ 0.41
VCX3B-204ENST00000453306 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 WRAP73Q9P2S5 460 aaPredicted RBP17.62■□□□□ 0.41
VCX3B-204ENST00000453306 NOD1Q9Y239 953 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 YBX2Q9Y2T7 364 aaKnown RBP17.62■□□□□ 0.41
VCX3B-204ENST00000453306 KIAA1217Q5T5P2 1943 aa17.62■□□□□ 0.41
VCX3B-204ENST00000453306 PITPNM1O00562 1244 aa17.61■□□□□ 0.41
VCX3B-204ENST00000453306 PPFIA4O75335 1185 aa17.61■□□□□ 0.41
VCX3B-204ENST00000453306 LGR5O75473 907 aa17.61■□□□□ 0.41
VCX3B-204ENST00000453306 STBD1O95210 358 aa17.61■□□□□ 0.41
VCX3B-204ENST00000453306 BAG4O95429 457 aaKnown RBP17.61■□□□□ 0.41
VCX3B-204ENST00000453306 TCF7P36402 384 aaPredicted RBP17.61■□□□□ 0.41
VCX3B-204ENST00000453306 FXR2P51116 673 aaKnown RBP eCLIP17.61■□□□□ 0.41
VCX3B-204ENST00000453306 UTP14CQ5TAP6 766 aaKnown RBP17.61■□□□□ 0.41
VCX3B-204ENST00000453306 CCDC60Q8IWA6 550 aaPredicted RBP17.61■□□□□ 0.41
VCX3B-204ENST00000453306 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
VCX3B-204ENST00000453306 IGSF22Q8N9C0 903 aa17.61■□□□□ 0.41
VCX3B-204ENST00000453306 LEO1Q8WVC0 666 aaPredicted RBP17.61■□□□□ 0.41
VCX3B-204ENST00000453306 MMTAG2Q9BU76 263 aaKnown RBP17.61■□□□□ 0.41
VCX3B-204ENST00000453306 DISC1Q9NRI5 854 aa17.61■□□□□ 0.41
VCX3B-204ENST00000453306 RGL1Q9NZL6 768 aa17.61■□□□□ 0.41
VCX3B-204ENST00000453306 MORC2Q9Y6X9 1032 aaPredicted RBP17.61■□□□□ 0.41
VCX3B-204ENST00000453306 VWA3AA6NCI4 1184 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 TNFRSF10AO00220 468 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 LAD1O00515 517 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 ZNF862O60290 1169 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 MARCH6O60337 910 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 LGALS2P05162 132 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 ZNF286BP0CG31 522 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 RABGGTBP53611 331 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 MRPS5P82675 430 aaKnown RBP17.6■□□□□ 0.41
VCX3B-204ENST00000453306 KRT76Q01546 638 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 ADGRE1Q14246 886 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 ECM1Q16610 540 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 SPECC1Q5M775 1068 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 AXDND1Q5T1B0 1012 aaPredicted RBP17.6■□□□□ 0.41
VCX3B-204ENST00000453306 ARL6IP4Q66PJ3 421 aaKnown RBP17.6■□□□□ 0.41
VCX3B-204ENST00000453306 NCAPH2Q6IBW4 605 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 SWSAP1Q6NVH7 229 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 DEFB128Q7Z7B8 93 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 PHOSPHO2Q8TCD6 241 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 SLC9A7Q96T83 725 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 HSD17B14Q9BPX1 270 aa17.6■□□□□ 0.41
VCX3B-204ENST00000453306 A0A087WWV3 80 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 SPTLC2O15270 562 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 SLITRK3O94933 977 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 YEATS4O95619 227 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 SPATA31C1P0DKV0 1188 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 HIC1Q14526 733 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 EPHA7Q15375 998 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 CCDC85BQ15834 202 aaPredicted RBP17.59■□□□□ 0.41
VCX3B-204ENST00000453306 ATL3Q6DD88 541 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 DTHD1Q6ZMT9 781 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 MIER3Q7Z3K6 550 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 ASB2Q96Q27 587 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 RNPEPQ9H4A4 650 aa17.59■□□□□ 0.41
VCX3B-204ENST00000453306 PCDHA10Q9Y5I2 948 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms