RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 GLIS3Q8NEA6 775 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 COPS5Q92905 334 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 PDLIM2Q96JY6 352 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 CAPNS2Q96L46 248 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 PCYT2Q99447 389 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 REEP2Q9BRK0 252 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 FGFBP2Q9BYJ0 223 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 VTA1Q9NP79 307 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 ANKEF1Q9NU02 776 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 EXOC1Q9NV70 894 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 PANK4Q9NVE7 773 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.68□□□□□ -1.34
SDC4P-201ENST00000453285 GABBR1Q9UBS5 961 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 DACH1Q9UI36 760 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 SAMM50Q9Y512 469 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 MAFBQ9Y5Q3 323 aaPredicted RBP6.68□□□□□ -1.34
SDC4P-201ENST00000453285 IGSF9BQ9UPX0 1349 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 TMEM150BA6NC51 233 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 BECN2A8MW95 431 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 RSPH10B2B2RC85 870 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 GOLGA6L19H0YKK7 550 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 LGR5O75473 907 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 ADCY5O95622 1261 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 GGPS1O95749 300 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 ALDH1A1P00352 501 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 RSPH10BP0C881 870 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 TXNP10599 105 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 IDEP14735 1019 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF18P17022 549 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 PTGS1P23219 599 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 GUCY2CP25092 1073 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 YWHABP31946 246 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF131P52739 623 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 PMS1P54277 932 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 STX17P56962 302 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 CAP1Q01518 475 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 SP4Q02446 784 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 RAD51AP2Q09MP3 1159 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 GRM1Q13255 1194 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 SPATA1Q5VX52 437 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 KLHL10Q6JEL2 608 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 MIS18BP1Q6P0N0 1132 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 SARM1Q6SZW1 724 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 METTL7BQ6UX53 244 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 PAXIP1Q6ZW49 1069 aaPredicted RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 ANO5Q75V66 913 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 EPM2AIP1Q7L775 607 aaPredicted RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 CCDC65Q8IXS2 484 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 REM2Q8IYK8 340 aaPredicted RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 TRMT44Q8IYL2 757 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 DAW1Q8N136 415 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 GUF1Q8N442 669 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 MSL3Q8N5Y2 521 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 SCFD2Q8WU76 684 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 NELFBQ8WX92 580 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 SEPT1Q8WYJ6 367 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 CCDC47Q96A33 483 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 DHTKD1Q96HY7 919 aaPredicted RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 FIZ1Q96SL8 496 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 CEP89Q96ST8 783 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 GPR20Q99678 358 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 DUSP9Q99956 384 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 TINF2Q9BSI4 451 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 CFHR5Q9BXR6 569 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 GTPBP4Q9BZE4 634 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 POLD4Q9HCU8 107 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 SLC39A2Q9NP94 309 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 PDLIM7Q9NR12 457 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 SAMSN1Q9NSI8 373 aaKnown RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 BMP2KQ9NSY1 1161 aaPredicted RBP6.67□□□□□ -1.34
SDC4P-201ENST00000453285 FANCLQ9NW38 375 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 FLRT1Q9NZU1 646 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 KCND2Q9NZV8 630 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 TCEAL9Q9UHQ7 104 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 RWDD2AQ9UIY3 292 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 CTNND2Q9UQB3 1225 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 MAPK8IP1Q9UQF2 711 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 TRIP11Q15643 1979 aa6.67□□□□□ -1.34
SDC4P-201ENST00000453285 FRMPD3Q5JV73 1810 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ARHGEF35A5YM69 484 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 TRIM49BA6NDI0 452 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 SFI1A8K8P3 1242 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 BACH1O14867 736 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ADCY6O43306 1168 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 DKC1O60832 514 aaKnown RBP eCLIP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ECM2O94769 699 aaPredicted RBP6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ATP1A3P13637 1013 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 GAP43P17677 238 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 CCNE1P24864 410 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 HOXD13P35453 343 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 PPP1R2P41236 205 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ADCYAP1R1P41586 468 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF75DP51815 510 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 CASP5P51878 434 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 NPEPPSP55786 919 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ARHGAP1Q07960 439 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 PAK1Q13153 545 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 IRF5Q13568 498 aa6.66□□□□□ -1.34
SDC4P-201ENST00000453285 ACVR2BQ13705 512 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms