RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SMIM35A0A1B0GVV1 85 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 LINC01565O15544 149 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 ATP9AO75110 1047 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 INSRRP14616 1297 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 MARK3P27448 753 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 ZXDAP98168 799 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 FBXL6Q8N531 539 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 POF1BQ8WVV4 589 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 CELF4Q9BZC1 486 aaKnown RBP16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 IL25Q9H293 177 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 SENP2Q9HC62 589 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 C1orf112Q9NSG2 853 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 SLC9A2Q9UBY0 812 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 LRFN2Q9ULH4 789 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 TELO2Q9Y4R8 837 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 NFASCO94856 1347 aa16.37■□□□□ 0.21
LYSMD3-202ENST00000453259 C5orf42Q9H799 3197 aa16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 ST18O60284 1047 aa16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 NRIP1P48552 1158 aa16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 SARSP49591 514 aaKnown RBP16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 SIGLEC14Q08ET2 396 aa16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 MB21D2Q8IYB1 491 aaPredicted RBP16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 FAM49AQ9H0Q0 323 aaPredicted RBP16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 LY9Q9HBG7 655 aa16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 USP15Q9Y4E8 981 aaPredicted RBP16.36■□□□□ 0.21
LYSMD3-202ENST00000453259 IGHDP01880 384 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 DNAJB1P25685 340 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 ANTXR2P58335 489 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 TTC22Q5TAA0 569 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 TMEM184AQ6ZMB5 413 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 RTN4RL1Q86UN2 441 aaPredicted RBP16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 RASGRP4Q8TDF6 673 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 TMEM87BQ96K49 555 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 SDF4Q9BRK5 362 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 TLE6Q9H808 572 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 TLR9Q9NR96 1032 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 LZTS1Q9Y250 596 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 KIAA1671Q9BY89 1806 aa16.35■□□□□ 0.21
LYSMD3-202ENST00000453259 GLP2RO95838 553 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 LIFRP42702 1097 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 IGBP1P78318 339 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 KRT76Q01546 638 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 ADGRD2Q7Z7M1 963 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 PRSS33Q8NF86 280 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 PIBF1Q8WXW3 757 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 SUSD6Q92537 303 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 MAP4K1Q92918 833 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 KCNH7Q9NS40 1196 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 PCDHB7Q9Y5E2 793 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 COL1A2P08123 1366 aa16.34■□□□□ 0.21
LYSMD3-202ENST00000453259 CCDC69A6NI79 296 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 SGSM2O43147 1006 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 FOSP01100 380 aaPredicted RBP16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 CHMLP26374 656 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 MCM5P33992 734 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 STAT5BP51692 787 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 PTH1RQ03431 593 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 PLCB4Q15147 1175 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 SLC24A5Q71RS6 500 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 ZNF710Q8N1W2 664 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 PCYT2Q99447 389 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 MXRA8Q9BRK3 442 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 PCDHA6Q9UN73 950 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 PCDHA8Q9Y5H6 950 aa16.33■□□□□ 0.2
LYSMD3-202ENST00000453259 hCG_1984214I3L0E3 225 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 GPR182O15218 404 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 ATG7O95352 703 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 GSPT1P15170 499 aaKnown RBP16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 HOXB8P17481 243 aaPredicted RBP16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 ACTR2P61160 394 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 DUSP6Q16828 381 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 PAN2Q504Q3 1202 aaKnown RBP16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 PPP1R18Q6NYC8 613 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 MTHFD1LQ6UB35 978 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 NFXL1Q6ZNB6 911 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 SRBD1Q8N5C6 995 aaKnown RBP16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 ZNF713Q8N859 430 aaPredicted RBP16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 MICAL1Q8TDZ2 1067 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 SNX27Q96L92 541 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 TMX1Q9H3N1 280 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 ELAC1Q9H777 363 aaKnown RBP16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 RGS18Q9NS28 235 aa16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 BARX2Q9UMQ3 279 aaPredicted RBP16.32■□□□□ 0.2
LYSMD3-202ENST00000453259 IGKV6D-21A0A0A0MT36 114 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 DENND3A2RUS2 1198 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 RBAK-RBAKDNI3L0D1 243 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 HOXA2O43364 376 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 PRC1O43663 620 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 HBP1O60381 514 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 RPS6KA5O75582 802 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 FGF18O76093 207 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 LAG3P18627 525 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 PPM1AP35813 382 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms