RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 UGCGQ16739 394 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 SEPT14Q6ZU15 432 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 SFR1Q86XK3 245 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 FAM114A1Q8IWE2 563 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 ANKRD13CQ8N6S4 541 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 SCFD1Q8WVM8 642 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 PARK7Q99497 189 aaKnown RBP15.8■□□□□ 0.12
USP39-207ENST00000450066 TSG101Q99816 390 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 BCAS3Q9H6U6 928 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 EFCC1Q9HA90 598 aa15.8■□□□□ 0.12
USP39-207ENST00000450066 DKC1O60832 514 aaKnown RBP eCLIP15.79■□□□□ 0.12
USP39-207ENST00000450066 RARRES1P49788 294 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 ZNF131P52739 623 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 ACTR2P61160 394 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 ZCWPW2Q504Y3 356 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 SPECC1LQ69YQ0 1117 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 PADI6Q6TGC4 694 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 EPM2AIP1Q7L775 607 aaPredicted RBP15.79■□□□□ 0.12
USP39-207ENST00000450066 ATP6V0A1Q93050 837 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 PARVGQ9HBI0 331 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 ANKEF1Q9NU02 776 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 MAGEC2Q9UBF1 373 aaPredicted RBP15.79■□□□□ 0.12
USP39-207ENST00000450066 SEL1LQ9UBV2 794 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 FAM13AO94988 1023 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 FGFR1OPO95684 399 aaKnown RBP15.79■□□□□ 0.12
USP39-207ENST00000450066 COPB1P53618 953 aaKnown RBP15.79■□□□□ 0.12
USP39-207ENST00000450066 ABHD15Q6UXT9 468 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 LRRC8AQ8IWT6 810 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 MORC4Q8TE76 937 aa15.79■□□□□ 0.12
USP39-207ENST00000450066 CACTINQ8WUQ7 758 aaKnown RBP15.79■□□□□ 0.12
USP39-207ENST00000450066 N4BP3O15049 544 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 ZNF157P51786 506 aaPredicted RBP15.78■□□□□ 0.12
USP39-207ENST00000450066 MIS18BP1Q6P0N0 1132 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 KCNV1Q6PIU1 500 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 CYFIP1Q7L576 1253 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 ABRAQ8N0Z2 381 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 MYCT1Q8N699 235 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 KCTD10Q9H3F6 313 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 MRPL44Q9H9J2 332 aaKnown RBP15.78■□□□□ 0.12
USP39-207ENST00000450066 GABBR1Q9UBS5 961 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 LRRC37A2A6NM11 1700 aa15.78■□□□□ 0.12
USP39-207ENST00000450066 TEX33O43247 280 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 STRNO43815 780 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 ATG7O95352 703 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 UBA1P22314 1058 aaKnown RBP15.77■□□□□ 0.12
USP39-207ENST00000450066 CASP5P51878 434 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 NEDD9Q14511 834 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 BMT2Q1RMZ1 405 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 SAPCD2Q86UD0 394 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 RASAL3Q86YV0 1011 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 CCDC150Q8NCX0 1101 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 CCDC43Q96MW1 224 aaKnown RBP15.77■□□□□ 0.12
USP39-207ENST00000450066 TIPINQ9BVW5 301 aa15.77■□□□□ 0.12
USP39-207ENST00000450066 SFI1A8K8P3 1242 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 SUPT20HL2P0C7V6 817 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 PBX1P40424 430 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 FKBP3Q00688 224 aaKnown RBP15.77■□□□□ 0.11
USP39-207ENST00000450066 LRMPQ12912 555 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 TBX2Q13207 712 aaPredicted RBP15.77■□□□□ 0.11
USP39-207ENST00000450066 SWSAP1Q6NVH7 229 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 OTUD6AQ7L8S5 288 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 CREBRFQ8IUR6 639 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 CNOT6LQ96LI5 555 aaKnown RBP15.77■□□□□ 0.11
USP39-207ENST00000450066 VPS16Q9H269 839 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 POLD4Q9HCU8 107 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 TAB2Q9NYJ8 693 aa15.77■□□□□ 0.11
USP39-207ENST00000450066 PASKQ96RG2 1323 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 ASB14A6NK59 587 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 ZNF862O60290 1169 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 HIP1RO75146 1068 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 SP4Q02446 784 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 MAPK7Q13164 816 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 ARID5BQ14865 1188 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 KNOP1Q1ED39 458 aaKnown RBP15.76■□□□□ 0.11
USP39-207ENST00000450066 FAM110CQ1W6H9 321 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 UTP14CQ5TAP6 766 aaKnown RBP15.76■□□□□ 0.11
USP39-207ENST00000450066 LRRC55Q6ZSA7 311 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 ANO5Q75V66 913 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 NELFCDQ8IXH7 590 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 DAW1Q8N136 415 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 ZNF507Q8TCN5 953 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 EEF2KMTQ96G04 330 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 ZCCHC17Q9NP64 241 aaKnown RBP15.76■□□□□ 0.11
USP39-207ENST00000450066 RRAGDQ9NQL2 400 aaPredicted RBP15.76■□□□□ 0.11
USP39-207ENST00000450066 TELO2Q9Y4R8 837 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 SYNGAP1Q96PV0 1343 aa15.76■□□□□ 0.11
USP39-207ENST00000450066 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
USP39-207ENST00000450066 BACH1O14867 736 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 EIF3DO15371 548 aaKnown RBP eCLIP15.75■□□□□ 0.11
USP39-207ENST00000450066 ZNF500O60304 480 aaPredicted RBP15.75■□□□□ 0.11
USP39-207ENST00000450066 FARP2O94887 1054 aaPredicted RBP15.75■□□□□ 0.11
USP39-207ENST00000450066 STBD1O95210 358 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 MYBP10242 640 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 SFPQP23246 707 aaKnown RBP eCLIP15.75■□□□□ 0.11
USP39-207ENST00000450066 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 RGMBQ6NW40 437 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 ARMCX5Q6P1M9 558 aa15.75■□□□□ 0.11
USP39-207ENST00000450066 CCDC60Q8IWA6 550 aaPredicted RBP15.75■□□□□ 0.11
USP39-207ENST00000450066 TUBGCP2Q9BSJ2 902 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms