RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 POMKQ9H5K3 350 aa9.32□□□□□ -0.92
LINC01961-201ENST00000449954 MKNK2Q9HBH9 465 aa9.32□□□□□ -0.92
LINC01961-201ENST00000449954 ZNF287Q9HBT7 754 aa9.32□□□□□ -0.92
LINC01961-201ENST00000449954 MTMR4Q9NYA4 1195 aa9.32□□□□□ -0.92
LINC01961-201ENST00000449954 FBXL21Q9UKT6 434 aa9.32□□□□□ -0.92
LINC01961-201ENST00000449954 USTQ9Y2C2 406 aa9.32□□□□□ -0.92
LINC01961-201ENST00000449954 MRPL42Q9Y6G3 142 aaKnown RBP9.32□□□□□ -0.92
LINC01961-201ENST00000449954 C17orf102A2RUQ5 167 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 NFIBO00712 420 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 WNT7AO00755 349 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 PER2O15055 1255 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 CTSHP09668 335 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 CCNYL3P0C7X3 344 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 ZNF286BP0CG31 522 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 SP9P0CG40 484 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 CALML3P27482 149 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 RBM10P98175 930 aaKnown RBP9.31□□□□□ -0.92
LINC01961-201ENST00000449954 TBC1D8BQ0IIM8 1120 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 CTR9Q6PD62 1173 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 SYCE2Q6PIF2 218 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 SLC30A10Q6XR72 485 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 SIX5Q8N196 739 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 RIN2Q8WYP3 895 aaPredicted RBP9.31□□□□□ -0.92
LINC01961-201ENST00000449954 ATP6V0A1Q93050 837 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 CCDC8Q9H0W5 538 aaPredicted RBP9.31□□□□□ -0.92
LINC01961-201ENST00000449954 ERVK-5Q9HDB9 667 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 TOR4AQ9NXH8 423 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 PNMA2Q9UL42 364 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 PRR12Q9ULL5 1215 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 DUSP12Q9UNI6 340 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 PLIN4Q96Q06 1357 aa9.31□□□□□ -0.92
LINC01961-201ENST00000449954 PLXNA4Q9HCM2 1894 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 HOXD8P13378 290 aaPredicted RBP9.3□□□□□ -0.92
LINC01961-201ENST00000449954 RFX1P22670 979 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 HOXC8P31273 242 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 MTHFRP42898 656 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 SHC2P98077 582 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 LAMC2Q13753 1193 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 LY6KQ17RY6 165 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 ZNF787Q6DD87 383 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 RNF207Q6ZRF8 634 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 CHST3Q7LGC8 479 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 MRGPRX2Q96LB1 330 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 ADAM7Q9H2U9 754 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 TTC3P53804 2025 aa9.3□□□□□ -0.92
LINC01961-201ENST00000449954 RPS6P62753 249 aaKnown RBP9.29□□□□□ -0.92
LINC01961-201ENST00000449954 TDGQ13569 410 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 PTPRNQ16849 979 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 SBK1Q52WX2 424 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 FAM26DQ5JW98 314 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 MYSM1Q5VVJ2 828 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 RUFY4Q6ZNE9 571 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 C1orf210Q8IVY1 113 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 CRIPAKQ8N1N5 446 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 NETO1Q8TDF5 533 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 DDX1Q92499 740 aaKnown RBP9.29□□□□□ -0.92
LINC01961-201ENST00000449954 CASP10Q92851 521 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 EAF2Q96CJ1 260 aaPredicted RBP9.29□□□□□ -0.92
LINC01961-201ENST00000449954 APOL5Q9BWW9 433 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 RANBP17Q9H2T7 1088 aaKnown RBP9.29□□□□□ -0.92
LINC01961-201ENST00000449954 EVA1BQ9NVM1 165 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 LIMD1Q9UGP4 676 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 USP18Q9UMW8 372 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 PCDHB12Q9Y5F1 795 aa9.29□□□□□ -0.92
LINC01961-201ENST00000449954 SLC30A4O14863 429 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 FSCN2O14926 492 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 PPFIA4O75335 1185 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 SURF6O75683 361 aaKnown RBP9.28□□□□□ -0.92
LINC01961-201ENST00000449954 PROS1P07225 676 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 GNAT1P11488 350 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 ADD2P35612 726 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 SNAP25P60880 206 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 SKOR1P84550 965 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 ZNF528Q3MIS6 628 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 RCSD1Q6JBY9 416 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 NPAS4Q8IUM7 802 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 ZNF444Q8N0Y2 327 aaPredicted RBP9.28□□□□□ -0.92
LINC01961-201ENST00000449954 SNIP1Q8TAD8 396 aaKnown RBP9.28□□□□□ -0.92
LINC01961-201ENST00000449954 OSBPL7Q9BZF2 842 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.28□□□□□ -0.92
LINC01961-201ENST00000449954 CYP26B1Q9NR63 512 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 AAASQ9NRG9 546 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 WNT16Q9UBV4 365 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 NOB1Q9ULX3 412 aaKnown RBP9.28□□□□□ -0.92
LINC01961-201ENST00000449954 SLC4A4Q9Y6R1 1079 aa9.28□□□□□ -0.92
LINC01961-201ENST00000449954 MYH7BA7E2Y1 1941 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 KIAA1217Q5T5P2 1943 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 CFAP99D6REC4 459 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 GOLIM4O00461 696 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 ENPP3O14638 875 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 TREHO43280 583 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 EOMESO95936 686 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 STAG3L1P0CL83 205 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 MCCP23508 829 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 PMLP29590 882 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 WNT7BP56706 349 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 CCDC184Q52MB2 194 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 DESI1Q6ICB0 168 aa9.27□□□□□ -0.93
LINC01961-201ENST00000449954 KIAA1841Q6NSI8 718 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms