RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SQORQ9Y6N5 450 aa14.65□□□□□ -0.06
AC004540.1-204ENST00000449537 FAM208BQ5VWN6 2430 aa14.65□□□□□ -0.06
AC004540.1-204ENST00000449537 ORC4O43929 436 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 GOLGA8HP0CJ92 632 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 PLCB3Q01970 1234 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 LMNB2Q03252 620 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 RARS2Q5T160 578 aaKnown RBP14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 GPATCH4Q5T3I0 446 aaKnown RBP14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 UTP14CQ5TAP6 766 aaKnown RBP14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 TMC7Q7Z402 723 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 C1orf210Q8IVY1 113 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 GPKOWQ92917 476 aaPredicted RBP eCLIP14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 BORCS6Q96GS4 357 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 TTC14Q96N46 770 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 SEC62Q99442 399 aaKnown RBP14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 CPVLQ9H3G5 476 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 WNT16Q9UBV4 365 aa14.64□□□□□ -0.07
AC004540.1-204ENST00000449537 GPR179Q6PRD1 2367 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 MRPS6P82932 125 aaKnown RBP14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 COL9A3Q14050 684 aaPredicted RBP14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 SPECC1Q5M775 1068 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 IER5Q5VY09 327 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 KIAA1841Q6NSI8 718 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 TRIM50Q86XT4 487 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 C12orf76Q8N812 135 aaPredicted RBP14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 SECISBP2LQ93073 1101 aaKnown RBP14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 ZFP91Q96JP5 570 aaPredicted RBP14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 GPR20Q99678 358 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 KCNK12Q9HB15 430 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 ECHDC1Q9NTX5 307 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 PADI3Q9ULW8 664 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 FANCMQ8IYD8 2048 aa14.63□□□□□ -0.07
AC004540.1-204ENST00000449537 LAG3P18627 525 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 SARSP49591 514 aaKnown RBP14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 HSD17B4P51659 736 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 KRT17Q04695 432 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 NEDD9Q14511 834 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 PGM5Q15124 567 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 RRP12Q5JTH9 1297 aaKnown RBP14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 XRRA1Q6P2D8 792 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 METTL7BQ6UX53 244 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 STOX1Q6ZVD7 989 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 CYFIP1Q7L576 1253 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 OTOP3Q7RTS5 596 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 MRPL43Q8N983 215 aaKnown RBP14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 MAP3K20Q9NYL2 800 aaKnown RBP14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 ANAPC4Q9UJX5 808 aa14.62□□□□□ -0.07
AC004540.1-204ENST00000449537 CLASP2O75122 1294 aaKnown RBP14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 RPLP2P05387 115 aaKnown RBP14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 FGRP09769 529 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 CCND2P30279 289 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 DMWDQ09019 674 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 PPFIA1Q13136 1202 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 PAK2Q13177 524 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 FAM102BQ5T8I3 360 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 ADGRF4Q8IZF3 695 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 TUBE1Q9UJT0 475 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 SIT1Q9Y3P8 196 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 FASNP49327 2511 aaKnown RBP14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 CACNA1IQ9P0X4 2223 aa14.61□□□□□ -0.07
AC004540.1-204ENST00000449537 KRBA1A5PL33 1030 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 M0QZ92 97 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 DCNP07585 359 aaKnown RBP14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 CFHP08603 1231 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 SMC1AQ14683 1233 aaKnown RBP14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 QRICH1Q2TAL8 776 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 GNPTABQ3T906 1256 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 KANK3Q6NY19 840 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 SIRT2Q8IXJ6 389 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 IL31RAQ8NI17 732 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 CWH43Q9H720 699 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 TBC1D17Q9HA65 648 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 VAT1LQ9HCJ6 419 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 DZANK1Q9NVP4 752 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 IGSF9Q9P2J2 1179 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 HCSTQ9UBK5 93 aa14.6□□□□□ -0.07
AC004540.1-204ENST00000449537 MBLAC1A4D2B0 266 aaPredicted RBP14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 C2orf71A6NGG8 1288 aa14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 HOXB3P14651 431 aaPredicted RBP14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 NFX1Q12986 1120 aaKnown RBP14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 BMS1Q14692 1282 aaKnown RBP14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 GRIK4Q16099 956 aa14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 PPM1JQ5JR12 505 aa14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 FAM43BQ6ZT52 329 aaPredicted RBP14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 TMEM87AQ8NBN3 555 aa14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 FAM49AQ9H0Q0 323 aaPredicted RBP14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 TMX1Q9H3N1 280 aa14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 PCDHA1Q9Y5I3 950 aa14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 TRPV2Q9Y5S1 764 aa14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 FNDC1Q4ZHG4 1894 aaPredicted RBP14.59□□□□□ -0.07
AC004540.1-204ENST00000449537 SPATA31C2B4DYI2 1134 aa14.58□□□□□ -0.08
AC004540.1-204ENST00000449537 NARSO43776 548 aaKnown RBP14.58□□□□□ -0.08
AC004540.1-204ENST00000449537 DHX16O60231 1041 aaKnown RBP14.58□□□□□ -0.08
AC004540.1-204ENST00000449537 HOXA13P31271 388 aaPredicted RBP14.58□□□□□ -0.08
AC004540.1-204ENST00000449537 PPM1AP35813 382 aa14.58□□□□□ -0.08
AC004540.1-204ENST00000449537 SP4Q02446 784 aa14.58□□□□□ -0.08
AC004540.1-204ENST00000449537 GHRHRQ02643 423 aa14.58□□□□□ -0.08
AC004540.1-204ENST00000449537 NONOQ15233 471 aaKnown RBP eCLIP14.58□□□□□ -0.08
AC004540.1-204ENST00000449537 MARCH8Q5T0T0 291 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms