RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SNX12Q9UMY4 172 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 C2CD2Q9Y426 696 aa14.69□□□□□ -0.06
SYNGAP1-204ENST00000449372 CFAP73A6NFT4 308 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 SCG2P13521 617 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 TNFRSF8P28908 595 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 GRM4Q14833 912 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 CCDC38Q502W7 563 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 MFSD14BQ5SR56 506 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 TRIM68Q6AZZ1 485 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 CERS5Q8N5B7 392 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 SLC44A5Q8NCS7 719 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 CCDC96Q2M329 555 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 RAPGEF5Q92565 580 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 AK8Q96MA6 479 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 DNAJC7Q99615 494 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 TSG101Q99816 390 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 LACRTQ9GZZ8 138 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 TMEM165Q9HC07 324 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 HYOU1Q9Y4L1 999 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 SCNN1BP51168 640 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 CDK17Q00537 523 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 CDC37Q16543 378 aaPredicted RBP14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 CNNM4Q6P4Q7 775 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 MAPKAPK5Q8IW41 473 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 CSGALNACT2Q8N6G5 542 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 MMTAG2Q9BU76 263 aaKnown RBP14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 COA1Q9GZY4 146 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 TAF1DQ9H5J8 278 aaPredicted RBP14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 SLC12A6Q9UHW9 1150 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 PLAAQ9Y263 795 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 SCN9AQ15858 1988 aa14.68□□□□□ -0.06
SYNGAP1-204ENST00000449372 USP17L3A6NCW0 530 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 USP17L4A6NCW7 530 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 GCOM1H8Y6P7 765 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 MYZAPP0CAP1 466 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 NPR1P16066 1061 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 USP17L1Q7RTZ2 530 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 NAF1Q96HR8 494 aaKnown RBP14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 RAB34Q9BZG1 259 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 ZNF287Q9HBT7 754 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 TMBIM4Q9HC24 238 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 BIN2Q9UBW5 565 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 SUGT1Q9Y2Z0 365 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 DUSP10Q9Y6W6 482 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 PLIN4Q96Q06 1357 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 SPDYE5A6NIY4 337 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 GSTA1P08263 222 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 CNGA1P29973 690 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 MCM7P33993 719 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 DBN1Q16643 649 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 SLC4A8Q2Y0W8 1093 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 SPICE1Q8N0Z3 855 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 ANKS4BQ8N8V4 417 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 CCDC197Q8NCU1 140 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 CALML4Q96GE6 196 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 SLX4Q8IY92 1834 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 C10orf71Q711Q0 1435 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 AKR1B10O60218 316 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 MAEAQ7L5Y9 396 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 SDCCAG8Q86SQ7 713 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 ERICH1Q86X53 443 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 STAG2Q8N3U4 1231 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 ATL2Q8NHH9 583 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 SMARCAL1Q9NZC9 954 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 WDR35Q9P2L0 1181 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 SLC12A4Q9UP95 1085 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 DAGLAQ9Y4D2 1042 aa14.67□□□□□ -0.06
SYNGAP1-204ENST00000449372 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 ESYT3A0FGR9 886 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 PALM3A6NDB9 673 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 CYTH3O43739 400 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 PRLRP16471 622 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 PIK3AP1Q6ZUJ8 805 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 PNMA1Q8ND90 353 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 PSMB7Q99436 277 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 LZTS2Q9BRK4 669 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 MMADHCQ9H3L0 296 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 EPB41L5Q9HCM4 733 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 ALADP13716 330 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 ALDH3A1P30838 453 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 GABPAQ06546 454 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 FIGNQ5HY92 759 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 ZNF772Q68DY9 489 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 RCCD1A6NED2 376 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 ATP2A2P16615 1042 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 CDK8P49336 464 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 FAM133BQ5BKY9 247 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 MREGQ8N565 214 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 PRCCQ92733 491 aaPredicted RBP14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 CDK5RAP3Q96JB5 506 aa14.66□□□□□ -0.06
SYNGAP1-204ENST00000449372 A0A1W2PQJ5 194 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 CXCR5P32302 372 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 POLE2P56282 527 aa14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 IFI16Q16666 785 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 ZNF572Q7Z3I7 529 aaPredicted RBP14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 NOC4LQ9BVI4 516 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-204ENST00000449372 GLI1P08151 1106 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms