RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PRAMEF19Q5SWL8 479 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 STAMQ92783 540 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 SMARCE1Q969G3 411 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 BHMT2Q9H2M3 363 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 ZNF302Q9NR11 478 aa21.5■■□□□ 1.03
RPS28-202ENST00000449223 MYMKA6NI61 221 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 SORBS3O60504 671 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 AKR1A1P14550 325 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 CYP11B2P19099 503 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 YWHABP31946 246 aaKnown RBP21.49■■□□□ 1.03
RPS28-202ENST00000449223 SLC26A2P50443 739 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 MAP3K21Q5TCX8 1036 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 FAM160B1Q5W0V3 765 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 PLPPR4Q7Z2D5 763 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 TRPV1Q8NER1 839 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 PIGOQ8TEQ8 1089 aa21.49■■□□□ 1.03
RPS28-202ENST00000449223 ERCC4Q92889 916 aaPredicted RBP21.49■■□□□ 1.03
RPS28-202ENST00000449223 HMGCRP04035 888 aa21.48■■□□□ 1.03
RPS28-202ENST00000449223 CCDC192P0DO97 292 aa21.48■■□□□ 1.03
RPS28-202ENST00000449223 RARRES1P49788 294 aa21.48■■□□□ 1.03
RPS28-202ENST00000449223 KCNB1Q14721 858 aa21.48■■□□□ 1.03
RPS28-202ENST00000449223 XKR3Q5GH77 459 aa21.48■■□□□ 1.03
RPS28-202ENST00000449223 GJC2Q5T442 439 aaPredicted RBP21.48■■□□□ 1.03
RPS28-202ENST00000449223 DNAJC19Q96DA6 116 aa21.48■■□□□ 1.03
RPS28-202ENST00000449223 PVALEFA0A1B0GWK0 134 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 A6NJR5 290 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 BACH1O14867 736 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 ZBTB39O15060 712 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 KLRC4O43908 158 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 ADCY3O60266 1144 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 PPFIA4O75335 1185 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 CASP1P29466 404 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 PRKCEQ02156 737 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 TYRO3Q06418 890 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 ARSHQ5FYA8 562 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 SASS6Q6UVJ0 657 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 ANO5Q75V66 913 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 DDX12PQ92771 950 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 BLZF1Q9H2G9 400 aa21.47■■□□□ 1.03
RPS28-202ENST00000449223 FRMD3A2A2Y4 597 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 SEPT4O43236 478 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 RPN1P04843 607 aaKnown RBP21.46■■□□□ 1.03
RPS28-202ENST00000449223 ATP4AP20648 1035 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 STAT5BP51692 787 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 NKX3-2P78367 333 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 CACNB2Q08289 660 aaPredicted RBP21.46■■□□□ 1.03
RPS28-202ENST00000449223 RINT1Q6NUQ1 792 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 C1orf186Q6ZWK4 172 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 OTUD6AQ7L8S5 288 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 GPBP1Q86WP2 473 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 SLAIN1Q8ND83 568 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 OR6J1Q8NGC5 347 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 RAET1EQ8TD07 263 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 AZI2Q9H6S1 392 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 BMP2KQ9NSY1 1161 aaPredicted RBP21.46■■□□□ 1.03
RPS28-202ENST00000449223 RMND1Q9NWS8 449 aa21.46■■□□□ 1.03
RPS28-202ENST00000449223 DUSP11O75319 330 aaKnown RBP21.45■■□□□ 1.02
RPS28-202ENST00000449223 RHOBTB3O94955 611 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 OATP04181 439 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 MMP3P08254 477 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 PTGS1P23219 599 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 EHHADHQ08426 723 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 MORC3Q14149 939 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 UNC13DQ70J99 1090 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 TLK2Q86UE8 772 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 AFG1LQ8WV93 481 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 FAM167AQ96KS9 214 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 NIFKQ9BYG3 293 aaKnown RBP21.45■■□□□ 1.02
RPS28-202ENST00000449223 SMARCAD1Q9H4L7 1026 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 TSKSQ9UJT2 592 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 MAN1B1Q9UKM7 699 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 PPME1Q9Y570 386 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 A0A087WWV3 80 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.45■■□□□ 1.02
RPS28-202ENST00000449223 ELNP15502 786 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 GUCY2CP25092 1073 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 NLRP12P59046 1061 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 DHX8Q14562 1220 aaKnown RBP21.45■■□□□ 1.02
RPS28-202ENST00000449223 STX1AQ16623 288 aa21.45■■□□□ 1.02
RPS28-202ENST00000449223 GTPBP4Q9BZE4 634 aaKnown RBP21.45■■□□□ 1.02
RPS28-202ENST00000449223 ARHGEF35A5YM69 484 aa21.44■■□□□ 1.02
RPS28-202ENST00000449223 CAVIN2O95810 425 aa21.44■■□□□ 1.02
RPS28-202ENST00000449223 SSBP05455 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
RPS28-202ENST00000449223 PRKAR2AP13861 404 aaKnown RBP21.44■■□□□ 1.02
RPS28-202ENST00000449223 ASIC1P78348 528 aa21.44■■□□□ 1.02
RPS28-202ENST00000449223 RUSC1Q9BVN2 902 aa21.44■■□□□ 1.02
RPS28-202ENST00000449223 TIPINQ9BVW5 301 aa21.44■■□□□ 1.02
RPS28-202ENST00000449223 UPF3AQ9H1J1 476 aaKnown RBP21.44■■□□□ 1.02
RPS28-202ENST00000449223 ANO10Q9NW15 660 aa21.44■■□□□ 1.02
RPS28-202ENST00000449223 CENPFP49454 3210 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 LGALS2P05162 132 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 BMP6P22004 513 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 TRIM32Q13049 653 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 GIT2Q14161 759 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 DGKDQ16760 1214 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 ATP8B4Q8TF62 1192 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 BBXQ8WY36 941 aaPredicted RBP21.43■■□□□ 1.02
RPS28-202ENST00000449223 C16orf70Q9BSU1 422 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 TSPY26PQ9H489 355 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 ERAP1Q9NZ08 941 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms