RNA–Protein interactions for RNA: ENST00000448992.5

RHBDD1-209, Transcript of rhomboid domain containing 1, humanhuman

TSL 4

Gene RHBDD1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-209ENST00000448992 NME8Q8N427 588 aa17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 CYP2W1Q8TAV3 490 aa17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 ZNF689Q96CS4 500 aaPredicted RBP17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 ZBTB10Q96DT7 871 aa17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 CELF4Q9BZC1 486 aaKnown RBP17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 AGO3Q9H9G7 860 aaKnown RBP17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 AGO4Q9HCK5 861 aaKnown RBP17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 BARHL2Q9NY43 387 aa17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 PRKAG3Q9UGI9 489 aa17.21■□□□□ 0.35
RHBDD1-209ENST00000448992 SMIM35A0A1B0GVV1 85 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 DDX39AO00148 427 aaKnown RBP17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 MMP1P03956 469 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 ARP10275 920 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 SREBF1P36956 1147 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 KRT76Q01546 638 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 CSPP1Q1MSJ5 1256 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 ODR4Q5SWX8 454 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 MTHFD1LQ6UB35 978 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 CMTR2Q8IYT2 770 aaKnown RBP17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 TRAPPC12Q8WVT3 735 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 TCEANC2Q96MN5 208 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 TCEAL9Q9UHQ7 104 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 IGSF9BQ9UPX0 1349 aa17.2■□□□□ 0.34
RHBDD1-209ENST00000448992 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 STXBP3O00186 592 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 SCG2P13521 617 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 ITGB3BPQ13352 177 aaPredicted RBP17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 COL19A1Q14993 1142 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 NAALADL2Q58DX5 795 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 TYW1BQ6NUM6 668 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 MIS18BP1Q6P0N0 1132 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 NIPA1Q7RTP0 329 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 TMEM260Q9NX78 707 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 PADI3Q9ULW8 664 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 GINS2Q9Y248 185 aa17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 MRPL42Q9Y6G3 142 aaKnown RBP17.19■□□□□ 0.34
RHBDD1-209ENST00000448992 CCDC196A0A1B0GTZ2 297 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 PRR33A8MZF0 331 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 MEIS1O00470 390 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 HBP1O60381 514 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 ATG7O95352 703 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 LINC00271P0C7V0 271 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 IBSPP21815 317 aaPredicted RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 RCAN1P53805 252 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 EXOSC10Q01780 885 aaKnown RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 NFX1Q12986 1120 aaKnown RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 PAN2Q504Q3 1202 aaKnown RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 MCTP2Q6DN12 878 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 FAM43BQ6ZT52 329 aaPredicted RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 LINC01599Q8WXQ3 324 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 P2RX5Q93086 422 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 POP1Q99575 1024 aaKnown RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 IGFLR1Q9H665 355 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 ALG13Q9NP73 1137 aaKnown RBP17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 ZNF302Q9NR11 478 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 KDM3AQ9Y4C1 1321 aa17.18■□□□□ 0.34
RHBDD1-209ENST00000448992 COL1A2P08123 1366 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 KLRC1P26715 233 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 CLK2P49760 499 aaKnown RBP17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 METAP2P50579 478 aaKnown RBP eCLIP17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 SETQ01105 290 aaPredicted RBP17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 FUT2Q10981 343 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 HYAL1Q12794 435 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 SPOUT1Q5T280 376 aaKnown RBP17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 JAKMIP3Q5VZ66 844 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 PDXDC2PQ6P474 469 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 PLA2G4DQ86XP0 818 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 ADHFE1Q8IWW8 467 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 ATP8B4Q8TF62 1192 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 C11orf16Q9NQ32 467 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 BRWD1Q9NSI6 2320 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 PLAGL2Q9UPG8 496 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 PCDHB7Q9Y5E2 793 aa17.17■□□□□ 0.34
RHBDD1-209ENST00000448992 TTC3P53804 2025 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 DENND3A2RUS2 1198 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 DCXO43602 365 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 CDC45O75419 566 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 RPS6KA5O75582 802 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 NDUFV1P49821 464 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 ZP2Q05996 745 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 CLUL1Q15846 466 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 PFKFB3Q16875 520 aaPredicted RBP17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 TMEM266Q2M3C6 531 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 ZNF484Q5JVG2 852 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 ABHD15Q6UXT9 468 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 RTN4RL1Q86UN2 441 aaPredicted RBP17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 UIMC1Q96RL1 719 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 C6orf50Q9HD87 102 aa17.16■□□□□ 0.34
RHBDD1-209ENST00000448992 AAASQ9NRG9 546 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms