RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 HBP1O60381 514 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 MOCS3O95396 460 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 SERPINC1P01008 464 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 ATICP31939 592 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 FMR1Q06787 632 aaKnown RBP eCLIP6.18□□□□□ -1.422e-6■■■■□ 22.9
CDC42BPA-209ENST00000448940 TSTA3Q13630 321 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 CATSPERGQ6ZRH7 1159 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 SETD7Q8WTS6 366 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 CCDC77Q9BR77 488 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 RNF26Q9BY78 433 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 BCO2Q9BYV7 579 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 C2orf40Q9H1Z8 148 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 LSM7Q9UK45 103 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 SIGLEC1Q9BZZ2 1709 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 CIITAP33076 1130 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 STARD3Q14849 445 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 UBE2SQ16763 222 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 PPP1R18Q6NYC8 613 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 PPFIBP1Q86W92 1011 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 TDRD5Q8NAT2 981 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZNF397Q8NF99 534 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 TBC1D5Q92609 795 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 GZF1Q9H116 711 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 DISC1Q9NRI5 854 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZSWIM5Q9P217 1185 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 GABBR1Q9UBS5 961 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 STRCQ7RTU9 1775 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 GSG1L2A8MUP6 293 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 SEPT4O43236 478 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 RNASEH1O60930 286 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 AFMP43652 599 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 C21orf59P57076 290 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 OSTNP61366 133 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 ALX1Q15699 326 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 SKOR2Q2VWA4 1001 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 USP17L6PQ6QN14 398 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 JAMLQ86YT9 394 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 RHPN2Q8IUC4 686 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 RIOX2Q8IUF8 465 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 MRPL44Q9H9J2 332 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 NALCNQ8IZF0 1738 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 ALDH2P05091 517 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 MYL4P12829 197 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 ADGRF4Q8IZF3 695 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 TNMDQ9H2S6 317 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 NCOA5Q9HCD5 579 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 CICQ96RK0 1608 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 RP1L1Q8IWN7 2480 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 K7ENM7 598 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 MBD3O95983 291 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 RAD51AP2Q09MP3 1159 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 CCINQ13939 588 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 FAM43AQ8N2R8 423 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 KMT5AQ9NQR1 393 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 KCNJ14Q9UNX9 436 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 FAN1Q9Y2M0 1017 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 PCDHB11Q9Y5F2 797 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 STXBP3O00186 592 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 NPM3O75607 178 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 IGHDP01880 384 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 OR52Z1P0C646 297 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 RASA1P20936 1047 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 TIGD5Q53EQ6 642 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 SAMD3Q8N6K7 520 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 SCFD1Q8WVM8 642 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 MYO5BQ9ULV0 1848 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 ASTN2O75129 1339 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 VWA5AO00534 786 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 GCNT3O95395 438 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 KRT5P13647 590 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 MSNP26038 577 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 TNNC1P63316 161 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 GET4Q7L5D6 327 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 DNERQ8NFT8 737 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 PRPF31Q8WWY3 499 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZNF668Q96K58 619 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 TUBE1Q9UJT0 475 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 PRG3Q9Y2Y8 225 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 COL4A3BPQ9Y5P4 624 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 CNTRLQ7Z7A1 2325 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 ADD1P35611 737 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 DAB2P98082 770 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 PRKCQQ04759 706 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 KIAA0753Q2KHM9 967 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 CEP55Q53EZ4 464 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 CEP135Q66GS9 1140 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 CTNNBL1Q8WYA6 563 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 DHX58Q96C10 678 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 GDAQ9Y2T3 454 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 IPO5O00410 1097 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 SDHBP21912 280 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 LIFRP42702 1097 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 ITKQ08881 620 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 MYO1EQ12965 1108 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 KRT40Q6A162 431 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 PGBD1Q96JS3 809 aa6.17□□□□□ -1.42
CDC42BPA-209ENST00000448940 MTA3Q9BTC8 594 aa6.17□□□□□ -1.42
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