RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RBM28Q9NW13 759 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 TUBE1Q9UJT0 475 aa15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 SQORQ9Y6N5 450 aa15.64■□□□□ 0.09
PDLIM2-213ENST00000448520 C5orf67F2Z3F1 127 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 PI4K2BG5E9Z4 385 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 CPLX1O14810 134 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 GPR37L1O60883 481 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 GHRP10912 638 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 MARK3P27448 753 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 BMPR1AP36894 532 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 FOSBP53539 338 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 UBE2SQ16763 222 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 IER5Q5VY09 327 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 RUFY4Q6ZNE9 571 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 HEATR3Q7Z4Q2 680 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 GJD3Q8N144 294 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 NEK9Q8TD19 979 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 DNAJB3Q8WWF6 145 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 MXRA8Q9BRK3 442 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 LRFN3Q9BTN0 628 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 SLC26A6Q9BXS9 759 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 LMAN2LQ9H0V9 348 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 GLT8D2Q9H1C3 349 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 NSUN3Q9H649 340 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 AZI2Q9H6S1 392 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 JPH1Q9HDC5 661 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 SLC9A2Q9UBY0 812 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 FAM50BQ9Y247 325 aa15.63■□□□□ 0.09
PDLIM2-213ENST00000448520 GRXCR2A6NFK2 248 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 LPIN1Q14693 890 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 FBXO47Q5MNV8 452 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 MARCH8Q5T0T0 291 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 PTCRAQ6ISU1 281 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 TSHZ1Q6ZSZ6 1077 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 PLPPR4Q7Z2D5 763 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 PABPC5Q96DU9 382 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 FAM122AQ96E09 287 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 AIFM3Q96NN9 605 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 SDF4Q9BRK5 362 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 C11orf84Q9BUA3 381 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 FTHL17Q9BXU8 183 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 RIC8AQ9NPQ8 531 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 KCNH7Q9NS40 1196 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 RAPGEFL1Q9UHV5 662 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 CDY2AQ9Y6F7 541 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 V9GY48 417 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 COL4A6Q14031 1691 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 NFASCO94856 1347 aa15.62■□□□□ 0.09
PDLIM2-213ENST00000448520 RALGAPA2Q2PPJ7 1873 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 NLRC5Q86WI3 1866 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 CCDC196A0A1B0GTZ2 297 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 hCG_1984214I3L0E3 225 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 M0QZ92 97 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 FDPSP14324 419 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 INSRRP14616 1297 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 IFNAR1P17181 557 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 PLA2G5P39877 138 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 MRPS6P82932 125 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 BECN1Q14457 450 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 COL19A1Q14993 1142 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 TCEAL5Q5H9L2 206 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 NME8Q8N427 588 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 ZNF713Q8N859 430 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 CLP1Q92989 425 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 PLVAPQ9BX97 442 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 PKD2L1Q9P0L9 805 aa15.61■□□□□ 0.09
PDLIM2-213ENST00000448520 CTNNB1P35222 781 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 SLC26A2P50443 739 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 STAT5BP51692 787 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 NAPAP54920 295 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 IGBP1P78318 339 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 SSRP1Q08945 709 aaKnown RBP15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 BTG3Q14201 252 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 PKN1Q16512 942 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 CEP55Q53EZ4 464 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 PPP1R18Q6NYC8 613 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 ZNF689Q96CS4 500 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 PCYT2Q99447 389 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 CD320Q9NPF0 282 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 GJB4Q9NTQ9 266 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 ORC3Q9UBD5 711 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 HCN4Q9Y3Q4 1203 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 PCDHA2Q9Y5H9 948 aa15.6■□□□□ 0.09
PDLIM2-213ENST00000448520 RBAK-RBAKDNI3L0D1 243 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 MEIS1O00470 390 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 DGKIO75912 1065 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 ATG7O95352 703 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 ALADP13716 330 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 SSTR3P32745 418 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 ACTR2P61160 394 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 AP3B2Q13367 1082 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 NAALADL2Q58DX5 795 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 WWC2Q6AWC2 1192 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 CPLX2Q6PUV4 134 aaKnown RBP15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 PRKAG3Q9UGI9 489 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 TRPV2Q9Y5S1 764 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 ADGRA3Q8IWK6 1321 aa15.59■□□□□ 0.09
PDLIM2-213ENST00000448520 SMIM35A0A1B0GVV1 85 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 SMCO2A6NFE2 343 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 357 ms