RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PHOSPHO2Q8TCD6 241 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 ATP8B4Q8TF62 1192 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 SLC9A7Q96T83 725 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 TEKT3Q9BXF9 490 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 NKX2-4Q9H2Z4 354 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 UNC45AQ9H3U1 944 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 DISC1Q9NRI5 854 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 GABBR1Q9UBS5 961 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 DDX25Q9UHL0 483 aaKnown RBP14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 TCEAL9Q9UHQ7 104 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 STXBP5LQ9Y2K9 1186 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 SAMM50Q9Y512 469 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 PCDHA11Q9Y5I1 949 aa14.41□□□□□ -0.1
PRPF40A-203ENST00000448428 FAM205CA6NFA0 338 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 SLC37A4O43826 429 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 MMP1P03956 469 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 KRT2P35908 639 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 GRIN2CQ14957 1233 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 KRT40Q6A162 431 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 PPP4R3AQ6IN85 833 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 MTHFD1LQ6UB35 978 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 TRMT1LQ7Z2T5 733 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 NEK8Q86SG6 692 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 CKAP2LQ8IYA6 745 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 ETNPPLQ8TBG4 499 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 TNFRSF25Q93038 417 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 LLPHQ9BRT6 129 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 PCDHA2Q9Y5H9 948 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 MICAL3Q7RTP6 2002 aa14.4□□□□□ -0.1
PRPF40A-203ENST00000448428 WDR64B1ANS9 1081 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 ZBTB42B2RXF5 422 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 BTBD18B2RXH4 712 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 CHMP2AO43633 222 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 KLRC1P26715 233 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 SFNP31947 248 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 KCNJ6P48051 423 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 DEFB103AP81534 67 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 MGAT3Q09327 533 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 RABEP1Q15276 862 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 ZNF484Q5JVG2 852 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 B3GNT9Q6UX72 402 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 TMCO2Q7Z6W1 182 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 RSPH3Q86UC2 560 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 HERC6Q8IVU3 1022 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 FAM49AQ9H0Q0 323 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 UPF2Q9HAU5 1272 aaKnown RBP14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 BRMS1Q9HCU9 246 aa14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 SH2B1Q9NRF2 756 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-203ENST00000448428 COL1A2P08123 1366 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 SMIM35A0A1B0GVV1 85 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 ZNF862O60290 1169 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 CCNT1O60563 726 aaKnown RBP14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 GCFC2P16383 781 aaKnown RBP14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 JAK3P52333 1124 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 MRPS6P82932 125 aaKnown RBP14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 TRIM29Q14134 588 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.38□□□□□ -0.113e-21■■■■■ 31.7
PRPF40A-203ENST00000448428 MIER3Q7Z3K6 550 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 SEPT8Q92599 483 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 FAM20AQ96MK3 541 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 SLC28A3Q9HAS3 691 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 KCNMB3Q9NPA1 279 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 CDY2AQ9Y6F7 541 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 IGSF9BQ9UPX0 1349 aa14.38□□□□□ -0.11
PRPF40A-203ENST00000448428 MYO9BQ13459 2157 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 EFCAB14O75071 495 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 RPLP2P05387 115 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 GUCY1B3Q02153 619 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 TMEM62Q0P6H9 643 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 LPIN1Q14693 890 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 UGCGQ16739 394 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 DIS3L2Q8IYB7 885 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 KIAA0319LQ8IZA0 1049 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 RDM1Q8NG50 284 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 HAS1Q92839 578 aa14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 NAP1L4Q99733 375 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-203ENST00000448428 KIF28PB7ZC32 967 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 CA3P07451 260 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 GHRP10912 638 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 HMGN5P82970 282 aaKnown RBP14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 FBXO47Q5MNV8 452 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 IER5Q5VY09 327 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 NME8Q8N427 588 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 C8orf76Q96K31 380 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 FAM167AQ96KS9 214 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 TBC1D32Q96NH3 1257 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 ZBED2Q9BTP6 218 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 IFIH1Q9BYX4 1025 aaKnown RBP14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 NRBP2Q9NSY0 501 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 VAV3Q9UKW4 847 aa14.36□□□□□ -0.11
PRPF40A-203ENST00000448428 EML1O00423 815 aa14.35□□□□□ -0.11
PRPF40A-203ENST00000448428 WNT7AO00755 349 aa14.35□□□□□ -0.11
PRPF40A-203ENST00000448428 TBX3O15119 743 aa14.35□□□□□ -0.11
PRPF40A-203ENST00000448428 TLL1O43897 1013 aa14.35□□□□□ -0.11
PRPF40A-203ENST00000448428 ST18O60284 1047 aa14.35□□□□□ -0.11
PRPF40A-203ENST00000448428 STBD1O95210 358 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms