RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SEMA6CQ9H3T2 930 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 GSX1Q9H4S2 264 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-205ENST00000447267 ACSS3Q9H6R3 686 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 ECM29Q5VYK3 1845 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 AK9Q5TCS8 1911 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 MBTPS2O43462 519 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 TAF5LO75529 589 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 IL1R1P14778 569 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 FOSL1P15407 271 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 GRIK1P39086 918 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 ERVK-24P63145 666 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 LARP1BQ659C4 914 aaKnown RBP6.41□□□□□ -1.38
SDCBP-205ENST00000447267 TMCO2Q7Z6W1 182 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-205ENST00000447267 ZAR1Q86SH2 424 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 SCLYQ96I15 445 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 POLR3GLQ9BT43 218 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 XPNPEP3Q9NQH7 507 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 CLDND1Q9NY35 253 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 TMOD2Q9NZR1 351 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 ADGRE2Q9UHX3 823 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 ANGPTL2Q9UKU9 493 aa6.41□□□□□ -1.38
SDCBP-205ENST00000447267 USP9XQ93008 2570 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-205ENST00000447267 TMEM238LA0A1B0GVL6 79 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 SOWAHDA6NJG2 315 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 RBAK-RBAKDNI3L0D1 243 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 PDE8AO60658 829 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 CYP11A1P05108 521 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 C1QTNF9P0C862 333 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 TAL1P17542 331 aaPredicted RBP6.4□□□□□ -1.38
SDCBP-205ENST00000447267 RAB6AP20340 208 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 CDK7P50613 346 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 ACLYP53396 1101 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 IRX3P78415 501 aaPredicted RBP6.4□□□□□ -1.38
SDCBP-205ENST00000447267 TCEAL5Q5H9L2 206 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 APOBEC3HQ6NTF7 200 aaKnown RBP6.4□□□□□ -1.38
SDCBP-205ENST00000447267 PAOXQ6QHF9 649 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 TMC7Q7Z402 723 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 RNF180Q86T96 592 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 HERC6Q8IVU3 1022 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 STK35Q8TDR2 534 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 RUBCNQ92622 972 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 PABPC5Q96DU9 382 aaKnown RBP6.4□□□□□ -1.38
SDCBP-205ENST00000447267 CDC5LQ99459 802 aaKnown RBP6.4□□□□□ -1.38
SDCBP-205ENST00000447267 RBCK1Q9BYM8 510 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 CCDC86Q9H6F5 360 aaKnown RBP6.4□□□□□ -1.38
SDCBP-205ENST00000447267 GREM2Q9H772 168 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 C1GALT1Q9NS00 363 aa6.4□□□□□ -1.38
SDCBP-205ENST00000447267 GBF1Q92538 1859 aa6.4□□□□□ -1.39
SDCBP-205ENST00000447267 VPS13AQ96RL7 3174 aa6.4□□□□□ -1.39
SDCBP-205ENST00000447267 SLC15A5A6NIM6 579 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 KIF28PB7ZC32 967 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 ZNF862O60290 1169 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 WNT11O96014 354 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 IRAK1P51617 712 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 HERVK_113P62684 666 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 PABPC4Q13310 644 aaKnown RBP eCLIP6.39□□□□□ -1.39
SDCBP-205ENST00000447267 ANGPT1Q15389 498 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 DYMQ7RTS9 669 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 DEFB128Q7Z7B8 93 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 ABI1Q8IZP0 508 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 FAM151AQ8WW52 585 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 ALKBH8Q96BT7 664 aaKnown RBP6.39□□□□□ -1.39
SDCBP-205ENST00000447267 TBC1D32Q96NH3 1257 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 CITED4Q96RK1 184 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 OSBPL1AQ9BXW6 950 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 DNAJC25Q9H1X3 360 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 HIPK3Q9H422 1215 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 AP4E1Q9UPM8 1137 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 ASPMQ8IZT6 3477 aa6.39□□□□□ -1.39
SDCBP-205ENST00000447267 LOC730098B7Z3J9 87 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 PI15O43692 258 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 PRNPP04156 253 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 RARBP10826 455 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 LIG1P18858 919 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 PRKAR2BP31323 418 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 KCNA10Q16322 511 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 FKBP1CQ5VVH2 108 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 ZNF765Q7L2R6 523 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 ZNF804AQ7Z570 1209 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 RPAINQ86UA6 219 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 RPUSD2Q8IZ73 545 aaKnown RBP6.38□□□□□ -1.39
SDCBP-205ENST00000447267 HAUS7Q99871 368 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 CORO1BQ9BR76 489 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 RTKNQ9BST9 563 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 ANKRD2Q9GZV1 360 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 WNT8AQ9H1J5 351 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 LRRFIP2Q9Y608 721 aaKnown RBP6.38□□□□□ -1.39
SDCBP-205ENST00000447267 U3KQE9 123 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 TNKSO95271 1327 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 FRMPD3Q5JV73 1810 aa6.38□□□□□ -1.39
SDCBP-205ENST00000447267 MYADML2A6NDP7 307 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 SRRM3A6NNA2 597 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-205ENST00000447267 TMPRSS2O15393 492 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 GADD45BO75293 160 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-205ENST00000447267 CNMDO75829 334 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 NEFLP07196 543 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 HOXC6P09630 235 aa6.37□□□□□ -1.39
SDCBP-205ENST00000447267 SDHBP21912 280 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms