RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SEPT11Q9NVA2 429 aaKnown RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 ARMCX3Q9UH62 379 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 ATP8A1Q9Y2Q0 1164 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 TLDC2A0PJX2 215 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 A6NNZ2 444 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 HMGB1P1B2RPK0 211 aaPredicted RBP15.53■□□□□ 0.08
ERCC3-203ENST00000445889 C6orf229H3BNL8 230 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 USP11P51784 963 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 CACNB3P54284 484 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 SETQ01105 290 aaPredicted RBP15.53■□□□□ 0.08
ERCC3-203ENST00000445889 DHX9Q08211 1270 aaKnown RBP15.53■□□□□ 0.08
ERCC3-203ENST00000445889 TUBB8Q3ZCM7 444 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 UBAP2Q5T6F2 1119 aaKnown RBP15.53■□□□□ 0.08
ERCC3-203ENST00000445889 CUL5Q93034 780 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 P2RX7Q99572 595 aaKnown RBP15.53■□□□□ 0.08
ERCC3-203ENST00000445889 GOPCQ9HD26 462 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 H0YGN5 161 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 ZBTB39O15060 712 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 FAM107AO95990 144 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 HSPA9P38646 679 aaKnown RBP15.53■□□□□ 0.08
ERCC3-203ENST00000445889 USP8P40818 1118 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 SWT1Q5T5J6 900 aaKnown RBP15.53■□□□□ 0.08
ERCC3-203ENST00000445889 CATSPER3Q86XQ3 398 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 CCDC13Q8IYE1 715 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 TPCN2Q8NHX9 752 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 CYP2W1Q8TAV3 490 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 GLG1Q92896 1179 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 NFS1Q9Y697 457 aa15.53■□□□□ 0.08
ERCC3-203ENST00000445889 ABCB11O95342 1321 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 PNMA6FA0A0J9YX94 578 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 ESYT2A0FGR8 921 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 FSBPO95073 299 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 USH1GQ495M9 461 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 MREGQ8N565 214 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 SCFD2Q8WU76 684 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 GEMIN8Q9NWZ8 242 aaKnown RBP15.52■□□□□ 0.08
ERCC3-203ENST00000445889 DDX20Q9UHI6 824 aaKnown RBP15.52■□□□□ 0.08
ERCC3-203ENST00000445889 TMEM59LQ9UK28 342 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 SCN7AQ01118 1682 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 ABCA3Q99758 1704 aa15.52■□□□□ 0.08
ERCC3-203ENST00000445889 FGGP02679 453 aa15.52■□□□□ 0.07
ERCC3-203ENST00000445889 MAP2K2P36507 400 aa15.52■□□□□ 0.07
ERCC3-203ENST00000445889 GRAPQ13588 217 aa15.52■□□□□ 0.07
ERCC3-203ENST00000445889 KRT71Q3SY84 523 aa15.52■□□□□ 0.07
ERCC3-203ENST00000445889 GLYCTKQ8IVS8 523 aa15.52■□□□□ 0.07
ERCC3-203ENST00000445889 LRRC57Q8N9N7 239 aa15.52■□□□□ 0.07
ERCC3-203ENST00000445889 RDH13Q8NBN7 331 aa15.52■□□□□ 0.07
ERCC3-203ENST00000445889 GRAPLQ8TC17 118 aaPredicted RBP15.52■□□□□ 0.07
ERCC3-203ENST00000445889 SYN2Q92777 582 aaPredicted RBP15.52■□□□□ 0.07
ERCC3-203ENST00000445889 REEP2Q9BRK0 252 aa15.52■□□□□ 0.07
ERCC3-203ENST00000445889 NUCKS1Q9H1E3 243 aaKnown RBP15.52■□□□□ 0.07
ERCC3-203ENST00000445889 PGRMC1O00264 195 aaKnown RBP15.51■□□□□ 0.07
ERCC3-203ENST00000445889 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.074e-6■■■□□ 15.1
ERCC3-203ENST00000445889 XRCC5P13010 732 aaKnown RBP15.51■□□□□ 0.07
ERCC3-203ENST00000445889 ZNF543Q08ER8 600 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 NBPF9Q3BBW0 867 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 PPP4R3AQ6IN85 833 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 CD302Q8IX05 232 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 PIGOQ8TEQ8 1089 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 CCDC114Q96M63 670 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 CEP63Q96MT8 703 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 RGL1Q9NZL6 768 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 PCDHA1Q9Y5I3 950 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 GOLGA6L7A0A1B0GV03 622 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 DNM1LO00429 736 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 GCNT3O95395 438 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 MRPL12P52815 198 aaKnown RBP15.51■□□□□ 0.07
ERCC3-203ENST00000445889 DHX36Q9H2U1 1008 aaKnown RBP15.51■□□□□ 0.07
ERCC3-203ENST00000445889 GCNT4Q9P109 453 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 LEMD3Q9Y2U8 911 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 LAMB1P07942 1786 aa15.51■□□□□ 0.07
ERCC3-203ENST00000445889 GMNCA6NCL1 334 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 AFPP02771 609 aaKnown RBP15.5■□□□□ 0.07
ERCC3-203ENST00000445889 SHBGP04278 402 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 TCP10Q12799 353 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 ZC2HC1CQ53FD0 456 aaPredicted RBP15.5■□□□□ 0.07
ERCC3-203ENST00000445889 DPY19L2P1Q6NXN4 242 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 CCDC121Q6ZUS5 278 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 RAPGEF5Q92565 580 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.5■□□□□ 0.072e-6■■□□□ 12.4
ERCC3-203ENST00000445889 OSBPL7Q9BZF2 842 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 LRRC27Q9C0I9 530 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 PLCB1Q9NQ66 1216 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 POLLQ9UGP5 575 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 PPP1R9AQ9ULJ8 1098 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 GALCP54803 685 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 GIT2Q14161 759 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 PLS1Q14651 629 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 COG2Q14746 738 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 TRMT1LQ7Z2T5 733 aaKnown RBP15.5■□□□□ 0.07
ERCC3-203ENST00000445889 ZFPM1Q8IX07 1006 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 BHMT2Q9H2M3 363 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 KLC4Q9NSK0 619 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 ROBO1Q9Y6N7 1651 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 LRRN2O75325 713 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 RPS6KA4O75676 772 aa15.5■□□□□ 0.07
ERCC3-203ENST00000445889 HOXA13P31271 388 aaPredicted RBP15.5■□□□□ 0.07
ERCC3-203ENST00000445889 SLC12A3P55017 1021 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms