RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 KCNC3Q14003 757 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 SYCE2Q6PIF2 218 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 DGLUCYQ7Z3D6 616 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 NME8Q8N427 588 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 VN1R2Q8NFZ6 395 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
SHANK2-209ENST00000445654 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-209ENST00000445654 FAM227BQ96M60 508 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 RTP3Q9BQQ7 232 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 BCAS3Q9H6U6 928 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 ENTPD7Q9NQZ7 604 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 SUPT16HQ9Y5B9 1047 aaKnown RBP16.06■□□□□ 0.16
SHANK2-209ENST00000445654 PCDHGC5Q9Y5F6 944 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 MYO15AQ9UKN7 3530 aa16.06■□□□□ 0.16
SHANK2-209ENST00000445654 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 PPP1R11O60927 126 aaPredicted RBP16.05■□□□□ 0.16
SHANK2-209ENST00000445654 PPM1AP35813 382 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 ERVFC1P60507 584 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 PLCB3Q01970 1234 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 SEMA3FQ13275 785 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 BMS1Q14692 1282 aaKnown RBP16.05■□□□□ 0.16
SHANK2-209ENST00000445654 PCNX4Q63HM2 1172 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 HOMER1Q86YM7 354 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 ZDHHC14Q8IZN3 488 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 TDRD5Q8NAT2 981 aaKnown RBP16.05■□□□□ 0.16
SHANK2-209ENST00000445654 COLGALT1Q8NBJ5 622 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
SHANK2-209ENST00000445654 CUL5Q93034 780 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 ADAM7Q9H2U9 754 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 ZSWIM5Q9P217 1185 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
SHANK2-209ENST00000445654 B4E1Z4 1266 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 KRT17Q04695 432 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 NMIQ13287 307 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-209ENST00000445654 PUM1Q14671 1186 aaKnown RBP eCLIP16.04■□□□□ 0.16
SHANK2-209ENST00000445654 PLPP4Q5VZY2 271 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 ZNF589Q86UQ0 364 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-209ENST00000445654 STAG2Q8N3U4 1231 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 GPRASP2Q96D09 838 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 TCF25Q9BQ70 676 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 CELF4Q9BZC1 486 aaKnown RBP16.04■□□□□ 0.16
SHANK2-209ENST00000445654 FAM49AQ9H0Q0 323 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-209ENST00000445654 RTEL1Q9NZ71 1219 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 USTQ9Y2C2 406 aa16.04■□□□□ 0.16
SHANK2-209ENST00000445654 SALL3Q9BXA9 1300 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 DENND3A2RUS2 1198 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 PALM3A6NDB9 673 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-209ENST00000445654 TBKBP1A7MCY6 615 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 C2CD4DB7Z1M9 353 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 HOXA2O43364 376 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 LMNAP02545 664 aaKnown RBP16.03■□□□□ 0.16
SHANK2-209ENST00000445654 AOC1P19801 751 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 SP100P23497 879 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-209ENST00000445654 RBM10P98175 930 aaKnown RBP16.03■□□□□ 0.16
SHANK2-209ENST00000445654 MARCH8Q5T0T0 291 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 SLC24A5Q71RS6 500 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 KCNG4Q8TDN1 519 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 AZI2Q9H6S1 392 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 PCDHA2Q9Y5H9 948 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 DCHS1Q96JQ0 3298 aa16.03■□□□□ 0.16
SHANK2-209ENST00000445654 FNDC1Q4ZHG4 1894 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-209ENST00000445654 MARK3P27448 753 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 IGBP1P78318 339 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 KRT76Q01546 638 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 IMMTQ16891 758 aaKnown RBP16.02■□□□□ 0.16
SHANK2-209ENST00000445654 TMC7Q7Z402 723 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 CCDC105Q8IYK2 499 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 FLCNQ8NFG4 579 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 PIGSQ96S52 555 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 APOL5Q9BWW9 433 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 POMKQ9H5K3 350 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 ATP6V0A4Q9HBG4 840 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 RGS18Q9NS28 235 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 DZANK1Q9NVP4 752 aa16.02■□□□□ 0.16
SHANK2-209ENST00000445654 SMIM35A0A1B0GVV1 85 aa16.01■□□□□ 0.15
SHANK2-209ENST00000445654 GPR182O15218 404 aa16.01■□□□□ 0.15
SHANK2-209ENST00000445654 MAFGO15525 162 aa16.01■□□□□ 0.15
SHANK2-209ENST00000445654 INSRRP14616 1297 aa16.01■□□□□ 0.15
SHANK2-209ENST00000445654 GATMP50440 423 aa16.01■□□□□ 0.15
SHANK2-209ENST00000445654 NFX1Q12986 1120 aaKnown RBP16.01■□□□□ 0.15
SHANK2-209ENST00000445654 SMC1AQ14683 1233 aaKnown RBP16.01■□□□□ 0.15
SHANK2-209ENST00000445654 ANGPT1Q15389 498 aa16.01■□□□□ 0.15
SHANK2-209ENST00000445654 ACSF2Q96CM8 615 aaPredicted RBP16.01■□□□□ 0.15
SHANK2-209ENST00000445654 ELAC1Q9H777 363 aaKnown RBP16.01■□□□□ 0.15
SHANK2-209ENST00000445654 TYW1Q9NV66 732 aaKnown RBP16.01■□□□□ 0.15
SHANK2-209ENST00000445654 TMEM161AQ9NX61 479 aa16.01■□□□□ 0.15
SHANK2-209ENST00000445654 VPS13AQ96RL7 3174 aa16■□□□□ 0.15
SHANK2-209ENST00000445654 GSTTP1A0A1W2PQM5 241 aa16■□□□□ 0.15
SHANK2-209ENST00000445654 CARNS1A5YM72 827 aa16■□□□□ 0.15
SHANK2-209ENST00000445654 RPS6KA5O75582 802 aa16■□□□□ 0.15
SHANK2-209ENST00000445654 PDE1AP54750 535 aa16■□□□□ 0.15
SHANK2-209ENST00000445654 ATAT1Q5SQI0 421 aa16■□□□□ 0.15
SHANK2-209ENST00000445654 KIAA1841Q6NSI8 718 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms