RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 MAATS1Q7Z4T9 603 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 DDX12PQ92771 950 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 SALL4Q9UJQ4 1053 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 NRXN2Q9P2S2 1712 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 MPHOSPH10O00566 681 aaKnown RBP20.7■□□□□ 0.9
PMPCB-204ENST00000444457 ECM2O94769 699 aaPredicted RBP20.7■□□□□ 0.9
PMPCB-204ENST00000444457 EHHADHQ08426 723 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 HHIPL2Q6UWX4 724 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 KCTD1Q719H9 257 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.7■□□□□ 0.9
PMPCB-204ENST00000444457 HAS1Q92839 578 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 MTMR8Q96EF0 704 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 LRRC27Q9C0I9 530 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 SLC24A3Q9HC58 644 aa20.7■□□□□ 0.9
PMPCB-204ENST00000444457 USP17L10C9JJH3 530 aa20.69■□□□□ 0.9
PMPCB-204ENST00000444457 PAEPP09466 180 aa20.69■□□□□ 0.9
PMPCB-204ENST00000444457 GHRP10912 638 aa20.69■□□□□ 0.9
PMPCB-204ENST00000444457 VWA3BQ502W6 1294 aa20.69■□□□□ 0.9
PMPCB-204ENST00000444457 NAIF1Q69YI7 327 aaPredicted RBP20.69■□□□□ 0.9
PMPCB-204ENST00000444457 APOBEC3HQ6NTF7 200 aaKnown RBP20.69■□□□□ 0.9
PMPCB-204ENST00000444457 EGFL6Q8IUX8 553 aa20.69■□□□□ 0.9
PMPCB-204ENST00000444457 TEKT1Q969V4 418 aa20.69■□□□□ 0.9
PMPCB-204ENST00000444457 ABCB11O95342 1321 aa20.69■□□□□ 0.9
PMPCB-204ENST00000444457 HOXA7P31268 230 aaPredicted RBP20.68■□□□□ 0.9
PMPCB-204ENST00000444457 EIF4A3P38919 411 aaKnown RBP20.68■□□□□ 0.9
PMPCB-204ENST00000444457 LRRC63Q05C16 580 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 ECM1Q16610 540 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 C2CD5Q86YS7 1000 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 CACNA2D3Q8IZS8 1091 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 NDST4Q9H3R1 872 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 SIPA1L1O43166 1804 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 GRID2IPA4D2P6 1211 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 GCOM1H8Y6P7 765 aaPredicted RBP20.68■□□□□ 0.9
PMPCB-204ENST00000444457 OPLAHO14841 1288 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 FGFR1OPO95684 399 aaKnown RBP20.68■□□□□ 0.9
PMPCB-204ENST00000444457 MYZAPP0CAP1 466 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 NFIAQ12857 509 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 MAN2A1Q16706 1144 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 FBXO41Q8TF61 875 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 HOOK2Q96ED9 719 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 PSTPIP2Q9H939 334 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 SIK3Q9Y2K2 1263 aa20.68■□□□□ 0.9
PMPCB-204ENST00000444457 H0YGN5 161 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 GRIK3Q13003 919 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 PSMD2Q13200 908 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 ZKSCAN8Q15776 578 aaPredicted RBP20.67■□□□□ 0.9
PMPCB-204ENST00000444457 RNF10Q8N5U6 811 aaKnown RBP20.67■□□□□ 0.9
PMPCB-204ENST00000444457 EIF1ADQ8N9N8 165 aaKnown RBP20.67■□□□□ 0.9
PMPCB-204ENST00000444457 CCT6BQ92526 530 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 TATDN2Q93075 761 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 NOX5Q96PH1 765 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 KDM4CQ9H3R0 1056 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 NFS1Q9Y697 457 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
PMPCB-204ENST00000444457 TRIM37O94972 964 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 SLURP2P0DP57 97 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 NPR1P16066 1061 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 GBP2P32456 591 aaPredicted RBP20.67■□□□□ 0.9
PMPCB-204ENST00000444457 BIRC3Q13489 604 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 LRRC55Q6ZSA7 311 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 GJA10Q969M2 543 aa20.67■□□□□ 0.9
PMPCB-204ENST00000444457 FRMD3A2A2Y4 597 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 AKR1B10O60218 316 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 ATP6V1G2O95670 118 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 MYBP10242 640 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 MAGEA1P43355 309 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 NAA25Q14CX7 972 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 RSRC1Q96IZ7 334 aaKnown RBP20.66■□□□□ 0.9
PMPCB-204ENST00000444457 DNAJC18Q9H819 358 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 ATF5Q9Y2D1 282 aaPredicted RBP20.66■□□□□ 0.9
PMPCB-204ENST00000444457 ELF3P78545 371 aaPredicted RBP20.66■□□□□ 0.9
PMPCB-204ENST00000444457 GLIS3Q8NEA6 775 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 DNAJC19Q96DA6 116 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 CCDC17Q96LX7 622 aa20.66■□□□□ 0.9
PMPCB-204ENST00000444457 EPHB6O15197 1021 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 MARCH6O60337 910 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 COASYQ13057 564 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 TRADDQ15628 312 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 FOXR2Q6PJQ5 311 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 ZFPM1Q8IX07 1006 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 HVCN1Q96D96 273 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 KRT12Q99456 494 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 TAF1DQ9H5J8 278 aaPredicted RBP20.65■□□□□ 0.9
PMPCB-204ENST00000444457 EBF2Q9HAK2 575 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 NOD2Q9HC29 1040 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 RGS17Q9UGC6 210 aaPredicted RBP20.65■□□□□ 0.9
PMPCB-204ENST00000444457 PCDHA12Q9UN75 941 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 KDM3AQ9Y4C1 1321 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 G3V3G9 751 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 HSD17B3P37058 310 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 CRKP46108 304 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 LRRC41Q15345 812 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 HYIQ5T013 277 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 DCAF8Q5TAQ9 597 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 GKAP1Q5VSY0 366 aaPredicted RBP20.65■□□□□ 0.9
PMPCB-204ENST00000444457 TSG101Q99816 390 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 BATF3Q9NR55 127 aa20.65■□□□□ 0.9
PMPCB-204ENST00000444457 FAM207AQ9NSI2 230 aaPredicted RBP20.65■□□□□ 0.9
PMPCB-204ENST00000444457 PPP1R12BO60237 982 aaPredicted RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 PPP2R2AP63151 447 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms