RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 PCDHA2Q9Y5H9 948 aa23.11■■□□□ 1.29
UBE2D4-205ENST00000443780 EYSQ5T1H1 3165 aa23.11■■□□□ 1.29
UBE2D4-205ENST00000443780 TRANK1O15050 2925 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 HBP1O60381 514 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 LARGE1O95461 756 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 AMHP03971 560 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 NECAB1Q8N987 351 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 APBB2Q92870 758 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 SLC5A5Q92911 643 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 RAD9AQ99638 391 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 IFIH1Q9BYX4 1025 aaKnown RBP23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 PCDHA10Q9Y5I2 948 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 MAFBQ9Y5Q3 323 aaPredicted RBP23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 PRUNE2Q8WUY3 3088 aa23.1■■□□□ 1.29
UBE2D4-205ENST00000443780 CYP3A7-CYP3A51PA0A087WV96 503 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 LCHNA4D1U4 455 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 PSAPP07602 524 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 XBP1P17861 261 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 ATP4AP20648 1035 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 CYP3A7P24462 503 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 MRPS6P82932 125 aaKnown RBP23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 NONOQ15233 471 aaKnown RBP eCLIP23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 Q4G0T1 1027 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 FAM117BQ6P1L5 589 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 KRT25Q7Z3Z0 450 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 GTF3C6Q969F1 213 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 RIT2Q99578 217 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 CERS4Q9HA82 394 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 GJB4Q9NTQ9 266 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 ORC3Q9UBD5 711 aaPredicted RBP23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 CDY2AQ9Y6F7 541 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 TTC3P53804 2025 aa23.09■■□□□ 1.29
UBE2D4-205ENST00000443780 TDP2O95551 362 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 GHRP10912 638 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 IGFBP4P22692 258 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 LPIN1Q14693 890 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 ZNF484Q5JVG2 852 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 MTHFD1LQ6UB35 978 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 MYOCDQ8IZQ8 938 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 SAMM50Q9Y512 469 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 COL1A2P08123 1366 aa23.08■■□□□ 1.29
UBE2D4-205ENST00000443780 SMIM35A0A1B0GVV1 85 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 WDR64B1ANS9 1081 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 GAS7O60861 476 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 FDPSP14324 419 aaKnown RBP23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 KLRC1P26715 233 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 INF2Q27J81 1249 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 FBXO47Q5MNV8 452 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 LRCH2Q5VUJ6 765 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 IER5Q5VY09 327 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 MOXD1Q6UVY6 613 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 CKAP2LQ8IYA6 745 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 USP38Q8NB14 1042 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 WASF1Q92558 559 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 MBOAT7Q96N66 472 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 DISC1Q9NRI5 854 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 GABBR1Q9UBS5 961 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 A0A0C4DFX4 3053 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 NLRC5Q86WI3 1866 aa23.07■■□□□ 1.28
UBE2D4-205ENST00000443780 ZBTB42B2RXF5 422 aa23.06■■□□□ 1.28
UBE2D4-205ENST00000443780 BBXQ8WY36 941 aaPredicted RBP23.06■■□□□ 1.28
UBE2D4-205ENST00000443780 GJA10Q969M2 543 aa23.06■■□□□ 1.28
UBE2D4-205ENST00000443780 TEKT3Q9BXF9 490 aa23.06■■□□□ 1.28
UBE2D4-205ENST00000443780 CCDC194A0A1B0GVG4 234 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 EPOPA6NHQ4 379 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 RFXAPO00287 272 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 PSMD10O75832 226 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 HTRA4P83105 476 aaPredicted RBP23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 TMEM62Q0P6H9 643 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 C8orf34Q49A92 452 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 TSHZ1Q6ZSZ6 1077 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 SPRED2Q7Z698 418 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 NME8Q8N427 588 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 OXER1Q8TDS5 423 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 ARNTL2Q8WYA1 636 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 TOP1MTQ969P6 601 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 UNC45AQ9H3U1 944 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 INSL6Q9Y581 213 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 TRPV2Q9Y5S1 764 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 SQORQ9Y6N5 450 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 COL4A4P53420 1690 aaPredicted RBP23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 UNC80Q8N2C7 3258 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 IGSF9BQ9UPX0 1349 aa23.05■■□□□ 1.28
UBE2D4-205ENST00000443780 M0QZ92 97 aa23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 CHMP2AO43633 222 aa23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 SFNP31947 248 aa23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 JAK3P52333 1124 aa23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 TRMT1LQ7Z2T5 733 aaKnown RBP23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 NSUN7Q8NE18 718 aaKnown RBP23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 PPM1EQ8WY54 764 aa23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 CELF4Q9BZC1 486 aaKnown RBP23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 AGO3Q9H9G7 860 aaKnown RBP23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 CUL9Q8IWT3 2517 aa23.04■■□□□ 1.28
UBE2D4-205ENST00000443780 LINC01553A4QN01 128 aa23.03■■□□□ 1.28
UBE2D4-205ENST00000443780 UPP2O95045 317 aa23.03■■□□□ 1.28
UBE2D4-205ENST00000443780 LETM2Q2VYF4 491 aa23.03■■□□□ 1.28
UBE2D4-205ENST00000443780 KIAA0319LQ8IZA0 1049 aa23.03■■□□□ 1.28
UBE2D4-205ENST00000443780 ETNPPLQ8TBG4 499 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms